Sesamum indicum (sesame): 105170039
Help
Entry
105170039 CDS
T04135
Name
(RefSeq) mRNA-decapping enzyme-like protein isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105170039
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105170039
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105170039
mRNA degradation factors
5'-3' decay
Decapping complex
105170039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
105170039
NCBI-ProteinID:
XP_011088930
UniProt:
A0A6I9TVD5
LinkDB
All DBs
Position
LG9:787801..795544
Genome browser
AA seq
369 aa
AA seq
DB search
MTQNGKLMPNLDEKTTKVLNLTVLQRIDPFVEEILITAAHVTFYEFNIDTSQWSRKDVEG
SLFVVKRTTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNASQEVNGIWFYNA
RECEEVANLFSRILNAYSKVPTKSKVSSTKSEFEELEAVPTLAVMDGPLEPPSSATPNVA
DVPDDPSFVNFFSTAMNIGGAPDAAISAQPYHSSGTVISTSRQQNVGLPTLASAQKPSNI
SASTPLISILDSTEPNAIAKHSTDLVKPSSFFGPPPSSAPLIMPSISSSMPTAPPLNPPG
NLHRPYGAPLLQPFPPPTPPPSLTPTSVPTPNYGPAISREKVREAIQMLVQDNQFVDLVY
RAVLNAHQS
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagaacgggaaattgatgcccaatctggatgagaagactaccaaggtgctgaat
ttgacggtcctgcagcgaatcgatcccttcgtggaggaaattctcattactgccgctcat
gtcaccttctacgagtttaacatcgacactagccaatggagtcggaaggatgtggagggt
tccctttttgttgtgaaaaggactacacaaccgcggttccagtttatagtaatgaatcgt
cggaacactgataatctggtggagaatctcttgggagattttgagtatgaagtgcaagtt
ccgtatttattatatcgaaatgcgtctcaggaggtaaatggaatatggttctacaatgca
cgtgaatgtgaagaggttgcaaatctatttagcaggatacttaatgcatattcaaaggtg
cccacgaagtcaaaagtatcttccaccaaaagcgagtttgaagaacttgaagcagttcca
acacttgcggtaatggatggtcctctagagccaccatcttctgctacccctaacgtcgca
gatgttcctgatgatccttcctttgtgaacttcttcagtactgcaatgaatattggaggt
gctccagatgcagcaatttctgctcagccttaccactcctctggaactgttatttctact
tctcgtcaacaaaatgttggtttgcccacgttagcatctgcccagaaaccatctaatata
tctgcttctacccctctaatatctatccttgacagcactgaacccaatgctatagcaaag
cattcaactgatctggtaaagccatcatccttttttgggccacctccttcctcagctcct
ctgattatgccttccatatcatcatctatgccaactgcacctccgctaaatcctcctgga
aatctacacagaccttatggtgcacctttacttcagccatttccaccaccaacacctcca
ccatcactcactccgacttcagtccctacaccaaattatgggccagctatcagcagagaa
aaagtccgggaagcaattcaaatgctcgttcaggacaatcaattcgtcgacttggtttac
cgagcagtgttgaatgcacaccagtcatga
DBGET
integrated database retrieval system
