Sesamum indicum (sesame): 105170174
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Entry
105170174 CDS
T04135
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105170174
03041 Spliceosome [BR:
sind03041
]
105170174
03036 Chromosome and associated proteins [BR:
sind03036
]
105170174
Enzymes [BR:
sind01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105170174
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105170174
mRNA cycle factors
Common to processing body (P body) and stress granule
105170174
Spliceosome [BR:
sind03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105170174
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105170174
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Mcm-like_N
Motif
Other DBs
NCBI-GeneID:
105170174
NCBI-ProteinID:
XP_011089120
UniProt:
A0A6I9TRN8
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Position
LG9:complement(1581806..1588048)
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AA seq
610 aa
AA seq
DB search
MLTSCSDSTEKAPAGGIGVPTRGPRTSYVPPHLRNRSPSVDTTSAPVLHYDAAVGSGHQG
HGGPPPAGIRSVGPRNDRGGVSSSRGGNGGGGAWNNRNNGWDHGRARESNPFQDELDTEQ
AFGAQENTGINFDAYDDIPVETSGKDVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQR
YAIPIALAGRDLMACAQTGSGKTAAFCFPIISGIMKSSQSALRPPRMPRMAFPLALILSP
TRELSLQIHEEARKFAYQTGVRVVVAYGGAPINLQLRELERGVDILVATPGRLVDLLERA
RVSLQLIRYLALDEADRMLDMGFEPQIRRIVQQMDMPPPGLRQTMLFSATFPKEIQRLAA
DFLSSYVFLAVGRVGSSTDLIVQRVEYVLETDKRSHLMDLLHAQRANGDQGKQALTLVFV
ETKKGADSLEHWLCMNHFPASAIHGDRSQQDREYALRSFKTGKTPILVATDVAARGLDIP
HVAHVVNFDLPNDIDDYVHRIGRTGRAGKTGLATAFFNENNSSLARPLADLMQEAHQEVP
AWLSRFAARSTFGRNRRGGGRFGSRDFRRDTPFNRGGMDSYGGGHINNGYVASGGYGGGF
GPTTVTSAWD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
atgctgacgtcctgctccgattcaactgagaaggcccctgctggtggaataggggtccct
actcgaggtccgcggaccagttatgttccaccacatcttaggaataggtctccctcagta
gacacaacctcagctccggttttgcattatgatgctgctgttggaagtggccaccaggga
catggtggtcctcctccagccgggattcgatccgttggtcctaggaatgatcgtggtggt
gttagcagcagccgtggtggtaatggtggtggtggtgcctggaataatagaaacaatggt
tgggatcatgggagggcaagagaatctaatccttttcaagacgaattagatacagaacag
gcatttggggctcaagagaatacagggatcaactttgatgcttacgatgatattccagtt
gaaactagcggaaaagatgttccccctccagtaaatacatttgccgagattgatttaggc
gaagctttaaacctaaatattagaaggtgtaaatatgtgaagcctacacctgtgcagcgg
tatgccataccaatagcactcgctggccgggatttgatggcgtgtgctcagactggctct
gggaagacagctgcgttttgcttcccaataattagtggaattatgaaaagcagccagtct
gctctgagaccccctcgcatgccacgcatggcatttccacttgccctcattctttctcca
actagggagctttccctgcaaattcatgaagaagctaggaaatttgcataccaaactggt
gtgagggtggttgttgcttatggtggtgcgcccataaatctacagcttagagaacttgaa
agaggtgttgatatacttgttgcaactcctggaaggttggtggatttgttggaaagagca
agagtttcattgcaactgattaggtacttagcgctggatgaggcagatagaatgttggac
atgggttttgaacctcaaataaggagaattgtgcaacaaatggacatgccacctcctggt
ttaagacaaacaatgctgtttagcgccaccttcccgaaggagattcagaggttggctgca
gattttctatcatcttacgtctttctggctgtagggagagttggttctagtactgatttg
attgtccagagagttgaatatgtgctagagactgataaaagaagccacctaatggacctt
cttcatgcacagagggctaacggtgatcaaggaaagcaagctctcactctggtttttgtg
gagacaaagaagggagctgattcccttgaacattggctttgcatgaatcactttcctgcc
tctgccattcatggtgacaggagtcaacaggatcgagaatatgccttgagatctttcaaa
actggcaaaacaccaatattggttgcaactgatgtggcagcacgtggtcttgatatcccg
catgttgcacatgtggtcaactttgatcttccaaatgatatagatgattatgtccaccgc
ataggacgcactggccgtgctggcaaaacagggttggcaactgccttctttaatgagaac
aattcctcattggcaagaccattggcagatttgatgcaagaagcacatcaggaagtgcct
gcctggctgtcccgatttgcagctcgatcaaccttcggaaggaaccgtcgtgggggagga
cgatttggtagtcgtgattttcgaagagacacccctttcaaccgaggtggaatggactca
tatggtgggggccacatcaacaatggatatgttgcatctggtgggtacggtggaggtttc
gggcctactactgtgactagcgcatgggactaa
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