Sesamum indicum (sesame): 105170209
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Entry
105170209 CDS
T04135
Name
(RefSeq) TATA-box-binding protein 2 isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105170209
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sind03000
]
105170209
03021 Transcription machinery [BR:
sind03021
]
105170209
Transcription factors [BR:
sind03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
105170209
Transcription machinery [BR:
sind03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105170209
RNA polymerase III system
TFIIIB
105170209
RNA polymerase I system
SL1/TIF-1B
105170209
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
105170209
NCBI-ProteinID:
XP_011089176
UniProt:
A0A6I9TYU9
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All DBs
Position
LG9:1769682..1775016
Genome browser
AA seq
201 aa
AA seq
DB search
MADPQGLEGNQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAA
VIMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIV
GSCDVKFPIRLEGLAYAHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVRD
ETYTAFENIYPVLTEFRKVQQ
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcctcaaggcctggaagggaaccaaccagttgatctctccaagcatccttct
ggcattgttccaactctccagaatattgtttcaacagtcaatttggactgcaaattggat
cttaaagctatagcattgcaagctcggaatgcagaatacaatcccaagcgttttgctgca
gtgattatgaggattagagagccaaaaacgactgcactcatatttgcatctggaaagatg
gtttgtacgggagccaagagcgaacaacaatcgaaattggctgctcggaagtatgctaga
attattcagaaacttggttttcctgcaaaatttaaggatttcaagattcagaacatagtc
ggttcctgtgatgtaaaatttccaattcgacttgaaggccttgcttatgctcatggtgcc
ttttcaagttatgagccagaactgttccctggattaatctaccggatgaaacaaccaaag
atagtgctgcttatttttgtctctgggaagattgttctcaccggagctaaggtcagagat
gagacctatactgcatttgagaatatatacccagttctcactgagtttcggaaagttcag
caatga
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