Sesamum indicum (sesame): 105170266
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Entry
105170266 CDS
T04135
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105170266
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105170266
03009 Ribosome biogenesis [BR:
sind03009
]
105170266
04131 Membrane trafficking [BR:
sind04131
]
105170266
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sind04147
]
105170266
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
105170266
Ribosome biogenesis [BR:
sind03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
105170266
Membrane trafficking [BR:
sind04131
]
SNARE
SNARE associated proteins
Others
105170266
Autophagy
Aggrephagy
Other aggrephagy associated proteins
105170266
Exosome [BR:
sind04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105170266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_33
CDC48_2
AAA_2
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
Parvo_NS1
ATPase_2
Viral_helicase1
AAA_18
IstB_IS21
ABC_tran
AAA_7
NACHT
NB-ARC
TsaE
AAA_24
DUF815
ResIII
Vps4_C
AAA_lid_PRS2_C
Zeta_toxin
Sigma54_activ_2
Zot
Phage_Mu_Gp48
Motif
Other DBs
NCBI-GeneID:
105170266
NCBI-ProteinID:
XP_011089245
UniProt:
A0A6I9TW48
LinkDB
All DBs
Position
LG9:1894067..1899146
Genome browser
AA seq
805 aa
AA seq
DB search
MSHQAESSDSKSGKKDFSTAILERKKAANRLIVDEAVNDDNSVVSLHPATMEKLQLFRGD
TILIKGKKRKDTVCIALADDTCEEPKIRMNKVVRTNLRVRLGDVVSVHQCPDVKYGKRVH
ILPLDDTIEGLTGDLFDAYLKPYFLEAYRPVRKGDHFLVRGGMRSVEFKVIETDPGEYCV
VAPDTEIFCEGEPVRREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYVGADLAALCT
EAALQCIREKMDVIDLEDDTIDAEILNSMAVTNEHFHTALGTSNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQI
FKACLRKSPLSKDVDLRALAKYTQGFSGADITEICQRACKYAIRETIEKDIERERRRREN
PDSMDEDLEDEVSEIKPAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFTE
PAAGQSGSDPFATSAGGADEDDLYS
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatcaagctgagtcgtctgattcgaaaagtggcaagaaggacttttcgacggca
atcttggagaggaagaaggctgcaaatcgcctgattgtggatgaggcggtcaacgacgat
aattccgttgtttccctccaccctgctaccatggagaagctccagcttttccgtggagac
actatcttgattaaggggaagaaaagaaaggatacagtttgcattgcgcttgctgatgat
acctgtgaagaaccaaagattaggatgaacaaggttgtcaggactaatttgagggttcgc
cttggggacgttgtatctgtgcaccagtgtccagatgtgaaatatggaaagcgtgtccac
atattgcccttggatgatacaatagaaggtcttactggggatctttttgatgcgtacctg
aaaccttactttctggaagcatatcgcccagtgaggaaaggggatcattttcttgtgaga
gggggaatgagaagtgtggaatttaaagtcattgagactgacccaggggaatattgtgtt
gttgccccggatactgagatcttctgtgaaggggagcctgtgagaagagaggatgaggat
aggctggatgaggttggctatgatgatgtaggtggtgttagaaagcagatggctcaaatc
cgtgaattggtggagttgcctctgagacaccctcagcttttcaaatctattggtgtgaaa
ccaccaaagggaattttgctttatggaccaccaggttctggaaagaccttgattgctaga
gctgttgctaatgaaactggtgctttcttctttttgattaatgggccggaaattatgtcc
aaattggctggagagagtgagagcaatctgaggaaggcttttgaggaggctgagaagaat
gccccatctattatttttattgatgaaattgattcaatagcacctaagagagagaagaca
catggtgaagttgagaggaggattgtttctcagctgttgactctcatggatgggttgaag
tcccgtgcccatgtcattgttatgggagcaactaatcgtccaaacagcattgacccagct
cttagaaggtttggcaggtttgacagggagatagacattggtgttcctgatgaagttgga
cgccttgaagttcttcggattcataccaagaacatgaaactttctgatgatgtagattta
gaaagaatagcaaaagatacccatggttatgttggtgctgaccttgctgctctctgcaca
gaagctgcgctgcagtgcatcagagagaaaatggatgttattgatttagaagatgataca
attgatgctgagatactaaactccatggctgttacaaatgagcacttccatactgctctt
ggaacaagcaatccttctgctttacgggagacagttgttgaagtgccgaatgtctcctgg
gaagatattggagggcttgaaaatgtcaagagggagcttcaggagactgttcaatatccc
gtggaacatccagagaaattcgagaaatttggtatgtcaccttcaaagggtgttcttttc
tatggtcctcctggatgtgggaagactttactggccaaggcaattgcaaatgaatgccaa
gccaatttcatcagtgttaaaggacctgaactgctcacaatgtggtttggagagagtgaa
gctaatgttcgtgaaatatttgacaaggctagacagtctgctccatgtgtcctcttcttt
gacgagcttgactctattgctactcagagaggaagcagtgttggagatgctggtggtgca
gctgaccgggtgcttaatcaacttctcactgaaatggatggcatgaatgctaaaaagact
gttttcataattggagctacaaacagacctgacattatcgatccagcacttctacgtcca
ggtcgtcttgatcagttaatatatatccctctgccagatgaggactcacgccatcagatc
ttcaaagcctgccttcgaaaatcaccactttccaaagatgttgatctgcgagcccttgct
aagtatactcagggattcagtggagctgatataacggaaatatgtcagagggcttgcaaa
tatgccataagagagaccattgagaaagacattgaaagagagaggagaagaagggagaat
cctgattccatggatgaggacctcgaggatgaagtttcagaaatcaagcctgcacatttc
gaggagtccatgaaatatgctcgtagaagtgtgagtgatgctgacatacggaagtaccag
gcatttgcccagaccttgcaacagtcgcggggatttggaactgaatttcgtttcactgaa
ccagcagccgggcaatctggatccgacccatttgcaacctctgctggtggagctgatgaa
gatgatctgtatagttag
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