Sesamum indicum (sesame): 105170281
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Entry
105170281 CDS
T04135
Name
(RefSeq) exosome complex component RRP41-like
KO
K12587
exosome complex component MTR3
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105170281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105170281
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
105170281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Methyltransf_2
Motif
Other DBs
NCBI-GeneID:
105170281
NCBI-ProteinID:
XP_011089271
UniProt:
A0A6I9TTP7
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Position
LG9:2071405..2076241
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AA seq
256 aa
AA seq
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MAGKSSATPTTYSPSLSGQKKKRPSFLTDSDWVRPDGRGPHQCRPAFLRTGAVNSASGSA
YAEFGNTKVIVSVFGPRESKKAMMYSDTGRLNCNVSYTTFATPIRGQAPETKDLSSMLHK
ALEGAIILKSFPKTTVDVFALVLESGGSDLPVITTCASLALADAGIMLYDMVASVSVSCI
GKNLLIDPVSEEESYQDGSLMITCMPSRNEVTQMTVTGEWSTPKIHEAMQLCLDACSKLG
KIMRSCLKEAASGPQD
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atggccggaaaatcaagcgctacgccgacgacatattcgccgtcgctgagcggtcagaag
aagaagaggccttcttttctgacggactccgattgggtccgacccgatggccgcggccct
caccagtgccgcccggcatttctaaggactggggcagtgaattctgcttcagggtctgct
tatgcagaatttgggaacacaaaggtcattgtatctgtatttggccccagggaaagtaaa
aaagcaatgatgtatagtgacacagggcgtttgaattgtaatgtcagttatacaactttt
gctactccaattcgtggtcaggctccagaaaccaaggacctttcctcaatgcttcacaaa
gctctggagggtgccattatactgaaatcttttccaaagacaactgttgatgtgtttgct
ttggtattggaatctggaggaagtgatctccctgtaattacaacatgtgccagtcttgct
ttagcagatgcaggaataatgttatatgacatggttgcctctgtttcagtgtcatgtatt
gggaagaatcttctcattgaccctgtatcagaagaagaaagctatcaagacggaagtcta
atgattacttgcatgccatcacgtaatgaggtgacacagatgactgtcacgggagagtgg
tcgacaccaaagatacatgaggcaatgcagttatgcctcgatgcttgttctaagcttggg
aagatcatgagatcatgtctgaaagaagctgcttctggtccacaggattag
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