KEGG   Sesamum indicum (sesame): 105170412
Entry
105170412         CDS       T04135                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105170412
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sind03019]
    105170412
   03041 Spliceosome [BR:sind03041]
    105170412
Messenger RNA biogenesis [BR:sind03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     105170412
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     105170412
Spliceosome [BR:sind03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    105170412
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 BRAP2
Other DBs
NCBI-GeneID: 105170412
NCBI-ProteinID: XP_011089468
UniProt: A0A6I9U6J1
LinkDB
Position
LG9:complement(3117749..3120587)
AA seq 344 aa
MASKRSDFGDGASPGKIFIGGLAKDTTLDTFVKYFGKYGEITDSVIMKDRHTGRPRGFGF
ITYADPSVVDTVIAETHVINGKQVEIKRTIPKGAGDSKDFKTKKIFVGGIPTAVTEDEFK
TFFSKYGKVVEHEIIRDHVTKRSRGFGFIVFDSEQVVDSLLADGNMIDMAGTQVEIKKAE
PKKPSNPTPAPAYGSDSRARAYGDSYGGFGSSYSSFGSGGFGPASYRSMGSGLGGRFGDY
GGYGGGSEFGGRYGDYASSEFGYRGDGPLGYSSRFGSYGGGFGGGYGGGLGAYGRGGGYG
SYGGAGSGAGYDSGPSAGYGGAGGGMYGGRAGYSGSSRYHPYAR
NT seq 1035 nt   +upstreamnt  +downstreamnt
atggcttccaagcgatcggatttcggcgatggcgccagccccgggaaaattttcatcggg
ggcctggcaaaagatactactttagatactttcgtgaagtactttggcaagtatggggag
ataacggactcggtgatcatgaaagatcggcataccggtcggccgcggggtttcggtttc
atcacttatgctgacccgtccgttgttgataccgttatcgctgaaacccatgttattaat
ggcaaacaagttgagatcaaaagaaccatcccgaaaggagctggcgactctaaggatttc
aaaacaaaaaagatttttgttggtgggatccccactgctgttactgaagatgagttcaag
actttcttttccaagtatgggaaggtcgtagagcatgaaattattcgagatcatgtgacc
aagaggtctcgtggatttggatttattgtgtttgacagtgaacaagttgttgatagtctc
ctagctgatgggaatatgattgatatggcgggtacccaggttgagatcaagaaggctgaa
ccaaagaaaccctcaaacccaacacctgctcctgcatatggtagtgattctagggcacgt
gcctatggtgatagttatggtggttttggcagctcatatagcagttttggcagtggcggt
tttggccctgcttcttataggtcaatgggatcaggtcttggtggtaggtttggtgactat
ggtggatatggtggtggaagtgaatttggtggtcggtatggggattatgccagtagcgaa
tttggttatcgaggagatggcccacttggctactctagtcgatttggttcttatggtgga
ggcttcggagggggatatggtggtgggctaggtgcctatggccgtggtggtggttatggc
agttatggtggggccggatctggtgctggttatgactctggccccagtgctggttatgga
ggagcaggagggggaatgtatggaggtagggcaggttatagtggcagtagtcgataccat
ccttatgccagatag

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