Sesamum indicum (sesame): 105170535
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Entry
105170535 CDS
T04135
Symbol
LOC105170535
Name
(RefSeq) E3 ubiquitin-protein ligase CHIP
KO
K09561
STIP1 homology and U-box containing protein 1 [EC:
2.3.2.27
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04120
Ubiquitin mediated proteolysis
sind04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105170535 (LOC105170535)
04120 Ubiquitin mediated proteolysis
105170535 (LOC105170535)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
sind03110
]
105170535 (LOC105170535)
04131 Membrane trafficking [BR:
sind04131
]
105170535 (LOC105170535)
04121 Ubiquitin system [BR:
sind04121
]
105170535 (LOC105170535)
Enzymes [BR:
sind01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105170535 (LOC105170535)
Chaperones and folding catalysts [BR:
sind03110
]
Other chaperones and cochaperones
Others
105170535 (LOC105170535)
Membrane trafficking [BR:
sind04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
105170535 (LOC105170535)
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
U-box type E3
105170535 (LOC105170535)
Multi subunit type E3
STUB1-CHIC2 complex
105170535 (LOC105170535)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
U-box
TPR_1
TPR_2
TPR_11
TPR_16
TPR_17
ANAPC3
TPR_14
TPR_8
TPR_9
CFAP70_TPR_C
zf-NOSIP
TPR_12
TPR_BSK1_C
CFAP70_mid_TPR
BRO1
zf-Nse
TPR_19
Motif
Other DBs
NCBI-GeneID:
105170535
NCBI-ProteinID:
XP_088741646
UniProt:
A0A6I9TUK8
LinkDB
All DBs
Position
LG9:4102489..4107220
Genome browser
AA seq
296 aa
AA seq
DB search
MSPTVAASAAEKQAEQLRQDGNTYFKRDRFGAAIDAYTEAIALCPNVPIYWTNRALCHRK
RNEWTRVEEDCRRAIQLDHYSVKAHYMLGLALLQRKEYAEGVRELEKALDLGRGANPKGY
MVEEIWQEIAKAKYLLWEHESTRRSWELQNLKQVLPFFPCLSFIYNLDVCAAALKEKHFL
DGSQMEGFVDESAKSTLDQLEALDRVFKKAAEDDSPTEVPDYLCCKITLDIFRDPVITPS
GVTYERAVILDHLQKVGKFDPITRDPLYPSQLVPNLAIKEAVRAYLDAHGWAYKMD
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccaacggtggcggcgtcggcggcggagaaacaggccgagcagctgagacaagac
gggaacacttacttcaagagagatcgatttggcgccgccattgatgcttatactgaggct
attgccttgtgcccaaatgttccgatatattggacgaatcgggctctttgccatcgcaag
aggaatgaatggacaagagtggaggaggattgtaggagagctattcagcttgatcattat
tctgtaaaggcccactatatgcttggtcttgcgctgctgcaaagaaaagaatatgcagaa
ggtgttagggaattggaaaaggcattggacctggggaggggggcaaaccccaagggttac
atggtagaggagatatggcaagagattgccaaagcaaaatacttgctgtgggaacatgaa
tctaccaggcgctcttgggaacttcaaaacttaaagcaagttcttcccttttttccttgt
ctttcctttatctacaaccttgatgtatgtgcggcagctctgaaggagaaacatttcctt
gatggttctcaaatggaaggttttgtagacgaaagtgccaagtctactcttgatcagttg
gaagctttagaccgagtattcaagaaagcggctgaagatgacagccccactgaggtgccg
gactatctatgttgtaaaatcactttggacattttccgtgatcccgtgattactccaagt
ggggttacatacgaaagagcagtgatcctagaccatctacagaaggttggcaaatttgac
ccgattacccgtgacccgctttacccatctcaactggtaccaaatttggccataaaagaa
gctgtaagagcatatctcgacgcgcacgggtgggcgtataagatggattga
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