Sesamum indicum (sesame): 105170568
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Entry
105170568 CDS
T04135
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT2 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105170568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105170568
Enzymes [BR:
sind01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105170568
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
105170568
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
105170568
NCBI-ProteinID:
XP_011089691
UniProt:
A0A6I9TUP5
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Position
LG9:4240946..4246059
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AA seq
306 aa
AA seq
DB search
MTPGGSTIGEIMESRNVDYDIAPEIVEYRRSPRRKFSTLNGAKRGIASNTAVHELLECPV
CMDVMYPPIHQCPNGHTLCSKCQAKVRCCPICRHELGNIRCLALERVAESLELPCRYQIL
GCQDIFPYQSRLRHEQNCTFRPYSCPYAGAECPVTGDIPFLVAHLKSDHKVDMHDGCTFN
HRYVKSNPHDVENATWMLTVFNCYGYQFCLHFEAFNLGTAPVYMAFIRFMGDDLEARKFS
YSLEVGSNGRKLTWQGVPRSIRDSHTKVRDSMDGLIIQRNMALFFSGGNRQELKLRVAGR
IWKEQT
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaccccaggaggtagcaccattggggaaataatggagtcccgcaatgtcgattatgat
attgcacctgagattgttgaatacagaaggtctcctcgtaggaagttttcgactcttaat
ggtgcaaagcgcggcatagcatcaaatactgctgtgcatgaactacttgaatgccctgtt
tgtatggatgttatgtaccctccaattcaccagtgcccaaacggccatactttatgctcg
aagtgtcaggcgaaagtacgttgttgcccaatttgccgtcatgaactggggaacataagg
tgcttggcacttgagcgagttgcagaatcacttgaactgccctgcagataccagattctc
ggctgtcaagatatttttccctatcagagcaggctgaggcatgaacagaattgcacgttc
cgtccctacagttgcccttacgccggagctgaatgccctgtcacgggtgatatcccgttt
cttgttgcacatctcaagagtgaccacaaggttgatatgcatgatggttgtacttttaac
cacagatatgtcaagtccaatccgcatgacgttgaaaatgcaacatggatgttaactgta
ttcaactgttacggctaccagttctgcctgcactttgaggccttcaatctaggaacggct
cccgtatacatggcgttcatccggttcatgggcgacgaccttgaagcaagaaagttcagt
tacagcttggaagtcggctcaaacggcagaaagctgacatggcaaggagttcctcggagc
atccgggacagtcatacaaaagtccgagacagcatggacgggctgatcatccaacgaaac
atggccctcttcttctctggaggcaaccggcaagagctgaagctgagggtcgccggacga
atatggaaagaacaaacataa
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