Sesamum indicum (sesame): 105170576
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Entry
105170576 CDS
T04135
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 37
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105170576
03041 Spliceosome [BR:
sind03041
]
105170576
03036 Chromosome and associated proteins [BR:
sind03036
]
105170576
Enzymes [BR:
sind01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
105170576
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105170576
mRNA cycle factors
Common to processing body (P body) and stress granule
105170576
Spliceosome [BR:
sind03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
105170576
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
105170576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
Cas3-like_C_2
ResIII
Mcm-like_N
Motif
Other DBs
NCBI-GeneID:
105170576
NCBI-ProteinID:
XP_011089700
UniProt:
A0A6I9TSS5
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Position
LG9:complement(4285945..4292949)
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AA seq
611 aa
AA seq
DB search
MPTSWSDSMEKAPANGGIGATSRASRSTYVPPHLRNRPSSAETSAAPVPHAGPALGNDMQ
GHVGPAVGGSHSVGHRRDRSGGGGGRGGGGGWNNRSGGWDRGREREANPFQDDVDTEPAF
GVQENTGINFDAYEDIPVETSGKNVPPPVNTFAEIDLGEALNLNIRRCKYVKPTPVQRHA
IPISLAGRDLMACAQTGSGKTAAFCFPIISGIMTNSQSGPRPPRMPRMAFPVALILSPTR
ELSIQIHEEARKFAYQTGVRVVVAYGGAPINLQLRELERGVDILVATPGRLVDLLERARV
SLQMIKYLALDEADRMLDMGFEPQIRRIVQQMDMPPPGVRQTLLFSATFPKEIQRLAADF
LSNYVFLAVGRVGSSTDLIVQRVEYVLETDKRSHLMDLLHAQRANGVQAKQALTLVFVET
KKGADSLENWLCINGFPATSIHGDRTQQEREYALRSFKSGKTPILVATDVAARGLDIPHV
AHVVNFDLPNDIDDYVHRIGRTGRAGKSGLATAFFNENNSSLARPLADLMQEANQEVPAW
LSRFAARSSYGRNRRGGGSGGRFGGRDFRRDSSNRGGGMDYYGSGNNVNGGYGASGGYGG
GYGPTVTSAWD
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgccaacttcttggtctgattcaatggagaaggctcctgcaaatggtggtataggggcc
acttctcgtgcttctcgatcaacttatgttcctccacatcttaggaacaggccttcttct
gcagaaacctccgcagccccagttccccatgctggcccggcattgggaaatgacatgcag
ggacatgttggccccgctgtaggtgggagccattcagttggtcataggagagacagaagt
ggaggcggtggcggtcgtggtggtggaggtggttggaataataggagcggaggttgggat
cgtggaagagaaagagaggctaatccttttcaagatgatgtagatacagaaccagcattc
ggggtacaagaaaatacagggatcaattttgatgcttatgaggatattccggtggagacg
agtgggaaaaatgtcccgcctccagtgaatacatttgctgagattgatttgggtgaagct
ttaaatctgaatattaggaggtgcaagtatgtgaagcccacacctgtgcaacgacatgcc
ataccaatatcacttgctggccgggatttgatggcttgcgcccagactggctctggaaag
actgcagccttttgtttcccaataattagtggaatcatgacaaacagccaatctggtcca
agaccaccgcgtatgccacgcatggcgtttccggttgctctcattctttctccaactagg
gagctttcaatccaaattcatgaggaagctaggaaatttgcatatcaaactggtgttagg
gtagttgttgcttatggtggtgctccaatcaatctacagcttcgagaactggaaagaggt
gtggacatacttgttgcaacacctggacggttggtggatttgttggaaagagcaagggtc
tcattgcaaatgattaagtatttagccctagatgaagcagatagaatgttagacatgggt
tttgaacctcaaataaggagaattgtgcaacaaatggacatgccacctccgggtgtacgg
caaacattgctatttagcgctacatttccaaaggagattcagagactggctgcagatttt
ctatcgaattatgtctttctggctgttggaagagttggttctagtactgacttgattgtc
caaagagttgaatatgtgcttgagactgacaaaagaagtcacctgatggacctccttcat
gcgcagagagcaaatggtgttcaggccaagcaagcgcttacactggtttttgttgagaca
aagaaaggagctgattcacttgaaaactggctttgcattaatggcttcccagccacttct
attcatggtgacagaacacagcaggagcgagaatatgctttgagatcctttaaaagtggc
aaaacgccaattctggttgcaactgatgtggcggctcgtggccttgacatccctcatgtt
gcacatgttgtcaactttgatcttccaaatgacattgatgattatgtccaccgcattgga
cgcactggtcgtgcaggtaaatcagggctggcaactgcattcttcaatgagaataattcc
tcattggcaaggccattggctgatttgatgcaagaagcaaatcaagaggttccagcatgg
ctctctcgctttgcagctcgatcctcctacgggaggaaccgtcgcggtggaggttctgga
ggaagattcggtggtcgtgatttccgaagagactcttccaatagaggaggtggaatggac
tactacggcagcggcaacaatgtcaacggtggatatggtgcttctggaggatatggtgga
ggttatggtcctactgtgactagtgcatgggactaa
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