Sesamum indicum (sesame): 105170616
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Entry
105170616 CDS
T04135
Name
(RefSeq) probable E3 ubiquitin-protein ligase RHC1A
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sind04131
]
105170616
04121 Ubiquitin system [BR:
sind04121
]
105170616
Enzymes [BR:
sind01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105170616
Membrane trafficking [BR:
sind04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
105170616
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105170616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-ANAPC11
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
105170616
NCBI-ProteinID:
XP_011089756
UniProt:
A0A6I9TXF8
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All DBs
Position
LG9:complement(4532725..4535121)
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AA seq
379 aa
AA seq
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MEEGDASRYWCHMCSQTVNPIIEIDTIKCPICQSGFVEEMASAATPGNDSSLGFELGGSD
SDRALSLWAPILLGMMGNPRRRRRIRRMEFEEEENEDDNENNHRHLDGETELDRELESIM
RRRRRSSATILQLLQGIRAGILSESANSETDQRIRDRDNDRDRERVILINPFNQTIIVQG
SYDPTSDSQNRAPIGSLGDYFIGPGLDLLLQHLSENDPNRYGTPPAQKEAVEALPTVKVE
ETLQCSVCLDDCEIGTEVKEMPCKHKFHSSCILPWLELHSSCPICRYQIPCDELKLDAEG
TRNNNTNSSQEISIDNNNAGNGGDDRNENGRQFSVSLPWPFSSLFSSSPSRASRGNSSTT
SISGSSANAPPSTSREDEN
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaggagacgcatcacggtattggtgtcatatgtgttcgcagacggtgaatcca
attatcgagatcgatacaataaaatgccccatatgccaaagtggcttcgtggaagaaatg
gcatctgcagccactccaggaaacgatagctctcttggatttgaacttggaggttctgat
tctgatcgtgccctctccctgtgggccccaatcttgctaggtatgatgggaaacccgcgc
cgtcgccggcggattaggcgcatggagtttgaggaggaagagaacgaggatgacaatgag
aacaatcaccgccaccttgatggggagacggagcttgaccgtgagctggagtcaataatg
aggaggaggaggaggagctcagctacaattctccagctcctccagggcatccgagctgga
atactatcagagtcagcaaactcggagactgatcaacggatcagggatagagataatgat
agggacagggagcgtgtgattttgattaatccctttaatcagacaatcattgttcagggt
tcctatgatcccactagtgattcccaaaaccgtgctccaattggctcactaggtgattat
ttcattggtcctggtttagacttgttgctgcagcatttgtcggagaatgatccaaacagg
tatggaacaccaccagcccagaaagaggcagtcgaggcattacccactgtgaaagttgag
gagacactgcaatgttcggtttgtttggatgactgtgaaattggcactgaagtcaaggag
atgccttgtaaacataagttccacagctcatgcattttgccatggctagaacttcatagc
tcttgtcccatatgcaggtatcagataccttgtgatgagttgaagctcgatgcagagggg
acaagaaacaataatactaacagcagtcaagaaattagtattgataacaacaatgctggt
aatggtggggatgacagaaacgaaaatgggagacagttttcggtgtcccttccatggcct
ttcagcagtttgttttcatcctccccttcccgagctagtcgtggaaattcatccacaaca
tctatatcagggtcatcagcaaatgcacccccgagtacttcacgtgaggatgagaactga
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integrated database retrieval system
