Sesamum indicum (sesame): 105170728
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Entry
105170728 CDS
T04135
Name
(RefSeq) probable helicase CHR10 isoform X1
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sind03036
]
105170728
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
105170728
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
DUF4399
Motif
Other DBs
NCBI-GeneID:
105170728
NCBI-ProteinID:
XP_011089928
UniProt:
A0A6I9TT77
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All DBs
Position
LG1:complement(16606254..16615280)
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AA seq
879 aa
AA seq
DB search
MDYKRRLIAAAKYVYGGDSRATEGARVDPSDFAVTAALKPHQVEGVSWLIRRYHLGVNVI
LGDEMGLGKTLQAISLLSYLKICQKSPGPFLVLCPLSVIDGWVSEVGKFAPKLRLLPYVG
EKEHRRTLRGEMHEHVKELSLSSHIPTLPFDVLLTTYDIALIDQDFLSQFPWHYAIIDEA
QRLKNPSSVLYNVLREQFVMPRKLLMTGTPIQNNITELWALMHFCMPLIFGTLEHFVADF
KEAGDPSCEDTEKVKEQFKILKYVLGAFMLRRTKSMLVESGTLSLPPVTEITVMAPLSPL
QKKVYVSILRKELPKLVALASGASSAQSLNNIVIQLRKACSHPYLFPGIEPEPYQEGEHL
VQASGKLLILDQLLQKLHDSGHRVLLFAQMTHTLDILQDFLELRKYTYERLDGSIRAEER
FAAIRRFSQNSVTKSASSDAYISSPFVFLISTRAGGVGLNLMAADTVIFYEQDWNPQVDK
QALQRAHRIGQSNHVLSINLVIGRTIEEVIMRRAERKLRLSHNVIGDNILEHEGGNIGGT
EAGDLKSVIFGLHVFDTTEMNMEKSDNLLDMGELIDLAEKVIASRHELQSDVSDRRFEIN
PMNLMDGHDLVMKERSQSIDFDPGLDEASYMSWVEKFKKASSADDTDMLELGNRRSLPDE
KHIKAEAARKKAEEKKLSKWEALGYHSLCVSSPVPPANQDMMSDSGSVHFVYGDCTNTAA
ICPSEPTIIFSCVDNSGNWGHGGLFDALARLSATIPNTYEQASEFGDLHLGDLHLIAVTE
DHSVSRTSNAPQWVGLAVVQSYNPRRKVPRSSISIADLEVCLAKASFSAAQYSASIHMPR
INYQDGSDRSEWYSVERLLRKYAAMYGINIYVYYYRRGE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atggactacaagcggaggctaatcgcggcggcgaagtacgtctacggcggagactcgcgc
gccaccgaaggagcgcgtgtcgatccatctgattttgcggtcacggcggcgcttaaacct
catcaagtcgaaggtgtctcgtggctcattcgacggtaccacctcggcgtcaatgtcata
cttggggacgagatgggactcgggaagactttgcaggctatctctcttttgagttacttg
aaaatttgtcagaagtctcctgggccgttcttggtgttatgtcctcttagtgtgattgat
ggttgggtgtctgaagtgggcaagtttgctccaaaattgagactgctcccttatgttgga
gaaaaggaacacagacgtacattacgaggggagatgcatgaacatgtaaaagagctgtca
ttatcatctcatatcccaacattgccatttgatgtgctattgacaacgtatgacatagca
ttgatcgatcaagattttctctctcagttcccatggcattatgcaataattgatgaggca
cagagactcaaaaatccttcgagtgtcttatataatgttctaagagagcaatttgtcatg
ccaagaaaattgttgatgacgggaacacctattcaaaacaatattactgaactttgggct
ttgatgcacttctgtatgccattaatctttggaacactggagcatttcgtcgctgatttc
aaggaagctggagatccttcttgcgaagatacagaaaaagtgaaggaacaatttaagatt
ttaaaatatgtgctgggagcattcatgcttcgaaggaccaaatctatgcttgtggaatct
ggaactctgtcactgccgcctgttaccgaaataaccgtgatggcacctttgtctccccta
cagaagaaggtttatgtgtcaatactgaggaaggaacttccgaagttggttgcacttgct
tctggagcttccagtgctcaatcgttgaataatattgtaattcagcttcggaaagcatgt
agtcacccatacctctttccaggtattgagcctgaaccgtatcaggagggtgagcacctg
gttcaggctagcggaaaacttctaattttggatcagctacttcagaagctgcatgacagt
ggacatcgagttctattgtttgcgcagatgactcatacgcttgatatattacaggacttc
ttagaattgaggaaatatacttatgagcgacttgatggttcaattcgagcggaggagcgc
ttcgctgcaatcagaaggttcagccaaaattctgtcactaaaagtgccagttctgatgct
tatattagcagtccatttgtctttttgatttccacacgagctgggggagtggggttaaat
cttatggctgctgacacggtcatattttatgagcaggattggaatccccaagtggataag
caggctctgcagcgtgctcacagaattggtcaaagcaatcatgtcttgtctattaatttg
gttatagggcgtacgattgaggaggttattatgcgtagagcagaacgaaagttacggctg
agtcataatgttataggggacaatattttggagcatgagggaggtaatattggagggact
gaagctggtgatctgaaatctgtcatatttgggttgcatgtttttgataccacggagatg
aatatggaaaaatcagataatctactagatatgggcgaactgatcgatttggctgaaaag
gttattgcgtcccgccatgagttacaatcagacgtgagtgacaggaggtttgagatcaat
ccaatgaatctgatggatggtcatgatctagtcatgaaagagaggtctcagtctattgat
tttgatcctggccttgatgaggcttcatacatgtcatgggttgagaagttcaagaaagca
tcatcagcagatgacactgatatgctggaattagggaataggagaagcttacctgatgaa
aaacacattaaagctgaagctgctcgcaagaaggcagaagagaagaaactatctaagtgg
gaagctcttggatatcattcattatgtgtcagtagtcctgttcctccggccaatcaggat
atgatgtcggattctggttcagttcattttgtttatggggactgcacaaacactgcagca
atttgtccttctgagccaactattatattcagctgtgttgataattctggaaactggggg
catgggggcctttttgatgcactggctaggctttcagctaccattcccaacacatacgag
caagcttcagaatttggggatctccatctcggagatcttcatctcatagcagtaactgag
gaccatagtgtgtcacgtactagtaatgctcctcaatgggtaggtttagctgttgtgcag
tcatataatcccaggcgtaaagtccctcgcagtagtatctccattgctgatttggaagtt
tgccttgcgaaagcatcattttcagctgctcaatattctgcttcgatccacatgccgcgt
attaattatcaagatggttcagatcgttcagaatggtattctgttgaacgccttctacga
aaatatgcagccatgtatggcataaatatatatgtatattattacagacgtggtgaatga
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