KEGG   Sesamum indicum (sesame): 105170907
Entry
105170907         CDS       T04135                                 
Name
(RefSeq) RNA-binding protein 8A
  KO
K12876  RNA-binding protein 8A
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03013  Nucleocytoplasmic transport
sind03015  mRNA surveillance pathway
sind03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105170907
  09122 Translation
   03013 Nucleocytoplasmic transport
    105170907
   03015 mRNA surveillance pathway
    105170907
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sind03019]
    105170907
   03041 Spliceosome [BR:sind03041]
    105170907
Messenger RNA biogenesis [BR:sind03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     105170907
Spliceosome [BR:sind03041]
 Complex C
  Other components
   EJC/TREX
    105170907
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_3
Other DBs
NCBI-GeneID: 105170907
NCBI-ProteinID: XP_011090141
UniProt: A0A6I9U898
LinkDB
Position
LG9:complement(6644917..6647674)
AA seq 199 aa
MASAEAEAVDFEPEDDDLMDEDVGDGSPNRGAAASIPRLKSAITGGGSSAPKKTKGRGFR
DEAAAEADRHARMSARFDSLDSEGGPGPERSIEGWIILVTGVHEEAQEDDLQNAFGEFGE
IKNLHLNLDRRTGFVKGYALIEFEKFDEAQRAISEMDGTELLTQTLNVDWAFSKGPFRRR
NMRRRSPRGHRSRSPRRRF
NT seq 600 nt   +upstreamnt  +downstreamnt
atggcgagcgcggaagcggaagcggtcgatttcgagcctgaggatgacgatctcatggac
gaggacgtcggcgacggttcccccaatcgaggtgccgccgccagtattcctaggttgaag
tccgccatcaccggaggtggctcatcggccccgaagaagactaagggccgtgggttccga
gacgaggcggcggcggaagctgaccgtcatgctcgcatgtctgctcgctttgactctctc
gactccgagggtggccctggcccggagcgatctattgaaggatggattattctagttact
ggagttcacgaagaggcgcaagaggacgatctacaaaatgcatttggtgaatttggagaa
ataaagaacttgcacttgaatcttgatcgtcgaacaggatttgtcaagggctatgctctg
attgaatttgagaagtttgatgaggcacaaagagctataagtgagatggatggaactgag
ctgctcacccagactctaaatgttgattgggcattcagcaaaggcccattcaggagaagg
aacatgaggaggagatcacctcgtggtcatcgttctaggagtccaaggaggagattttga

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