Sesamum indicum (sesame): 105170922
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Entry
105170922 CDS
T04135
Name
(RefSeq) protein CHROMATIN REMODELING 5 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105170922
03036 Chromosome and associated proteins [BR:
sind03036
]
105170922
Transcription machinery [BR:
sind03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
105170922
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
105170922
SLIK complex
105170922
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
Helicase_C
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
SWI2_SNF2
OAM_alpha
Motif
Other DBs
NCBI-GeneID:
105170922
NCBI-ProteinID:
XP_011090159
UniProt:
A0A6I9U120
LinkDB
All DBs
Position
LG9:6748221..6767282
Genome browser
AA seq
1716 aa
AA seq
DB search
MAFFRNSSGGVVEQISVSETSHSQQLTMNNSRLQENVATDNEEMPGPTSSINIGEDSSSN
IRIGKTQPHMRGTTMGGKWGSTFWKNTQSKTMPHGASESGEESKSGSEYKGSELEESSDG
AEDRMESENDDDAQKAVSGKGHQIVPADEMLSDEYYEQDGDDQTESLNHHRAVNNSSGFS
SKPPPRLAADSSISRKSKGLKANKYDDEDADYEEDDDEEEDEDDPDDADFDPDYGATRGP
RGIKDKDDDWGAEESDEEDNVEDDDLDFSDDDDVYFKKNKAKQSGKSGRNLKSTRGLRSI
ASSSRRKKGRTSFEEDDEESSAEESENGSDEDFRSTRRGASVQRKNVGRSASASVSSRNN
ELRTSGRSVRKVSYVESDESEDIDEGKKKNLKKEEAEEEDGDAIEKVLWHQPKGMAEEAL
RNNKSTEPVLMSYLFDSEPDWSEMEFLIKWKGQSHLHCQWKPFFELQNLSGFKKVLNYTK
KVTEDIRYRKMVSREEIEVNDVSKEMDLDIIKQNSQVERVIADRLIKDSLGDVVPEYLVK
WQGLSYAEATWEKDTDISFAQDAIDEYKAREAAAMVQGKTVDFQRKKSKGSLRKLDQQPE
WLKGGNLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQNAQEIQGPFL
VVVPLSTLSNWAKEFRKWLPDMNVIIYVGTRASREVCQQYEFFNEKKTGRSIKFDTLLTT
YEVLLKDKAVLSKIKWNYLMVDEAHRLKNSEASLYTTLSEFSTKNKLLITGTPLQNSVEE
LWALLHFLDPDKFRSKDDFVQKYKNLSSFNEMELANLHMELRPHILRRVIKDVEKSLPPK
IERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCNHPFLFESAD
HGYGGDTNFLGSTKLERIILSSGKLVILDKLLNRLHETNHRVLIFSQMVRMLDLLAEYLS
LKGFQFQRLDGSTKAELRQQAMDHFNAPGSEDFCFLLSTRAGGLGINLATADTVIIFDSD
WNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKKKMVLDHLVIQKLNAEGR
LEKKEAKKGSSFDKNELSAILRFGAEELFKEDKNDEESKKRLLSMDIDEILERAEKVEDK
VNEGEEGHELLSAFKVANFCSAEDDGTFWSRMIKPEAIAQAEDALAPRAARNIRSYAEAI
PPERSTNKRKKKGVEPQERLSKRRRADSGYSLPVLEGATAQVRGWSYGNLPKRDATRFFR
AVKKFGNDSQISLIAAEVGGTVEAAPTEAQIELYDALIDGCREAVKGETLDPKGPLLDFF
GVPVKADEVLSRVEELQLLAKRISRYEDPISQFRALGYLKPSTWSKGCGWNQKDDARLLL
GIHYHGFGNWEKIRLDEKLGLTKKIAPVELQHHETFLPRAPQLKERATQLLEMEVAAVGG
KNSNVKVGRKNAKRQKETFMTSRGRGRQGKPGSPSVNVQANRKRAPKSQKIEPLVKEEGE
MSDNEEVYEQFKEVKWREWCEDVMIDEEKTLKRLQKLQSTSADLPKEKVLSKIRNYLQLI
GRRIDQIVSEYEQESYRRGRMTTRLWNYVSTFSNLSGERLQQIYSKLKQEQQVAGVGPSH
INGSAPGHQTAAFTHRDLDVGKFEAWKRRKRAEADASHIQHPHQRPSNNGTWLPDPNSSG
ILGPPPSDGRQFSNGRPYRMQPAGFPPRQGFSSGIK
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atggcgttttttagaaattcttctggtggagtagtagaacagatttcagtgagtgagaca
agccattcacagcagctgacaatgaataacagtagacttcaggagaatgtggctaccgat
aatgaggaaatgccagggcctacatctagtataaatattggagaagacagtagcagtaat
atcaggataggaaaaacacagcctcatatgaggggtacgactatggggggaaagtggggt
tcgactttttggaagaatacacagtcaaagacaatgccccatggagcatcagagtcaggg
gaggagtctaagagtgggtccgaatacaaagggtctgaattggaggaatcatctgatgga
gcagaggacaggatggaatccgaaaatgacgacgatgcacaaaaagcagtatctggaaag
ggacatcagattgttcctgcagatgagatgttatctgatgagtattatgagcaggatggt
gatgatcagactgagtctctgaatcatcatagagcagtgaacaactcaagtgggtttagt
tcgaagccaccacctcggcttgctgctgatagtagtatctctagaaaatcaaaggggttg
aaagccaacaaatacgatgatgaagatgctgactatgaagaagatgatgacgaagaggaa
gatgaagatgaccctgatgatgctgactttgatcctgattatggggcgacaagggggccc
agaggaatcaaggataaagatgatgattggggtgccgaagaatctgatgaggaggataat
gttgaggatgatgatttggatttctcagacgacgatgatgtctactttaagaaaaataag
gccaaacaatcaggtaagagtggtcgtaatttgaagtctaccaggggacttagatcaatt
gcttcatccagtcggcgaaagaaaggtaggacatcttttgaagaagatgatgaagagtca
tctgccgaggaatctgaaaatggtagtgatgaggactttagaagtacaaggagaggtgca
tcagttcaaaggaagaatgttggtcgatctgcttcagcttctgtttctagtaggaacaat
gaactgcgaacatcaggtcgttcagtgcggaaagtatcatatgttgagagtgatgaaagt
gaagatattgatgaaggcaaaaaaaagaacctgaagaaggaagaggctgaagaagaagac
ggcgatgcgattgagaaggtattatggcatcaaccaaagggcatggctgaagaagcttta
aggaataataaatcgaccgagcctgtgttgatgagctatttgtttgactcggaaccggat
tggagtgagatggagtttctaataaagtggaaaggccagtcacatttacactgtcaatgg
aaaccattttttgagttgcagaatctcagtggttttaagaaggttttgaattataccaaa
aaagttacagaagatataaggtacaggaagatggtatctcgggaggagattgaggtaaat
gatgtcagcaaggaaatggacctggatatcataaaacagaacagtcaggtggagagagtg
attgcagatagactcatcaaagatagtttgggtgatgtagtaccagaatatttggtcaag
tggcaaggactgtcttatgctgaagctacttgggaaaaggatactgatatttcgtttgcc
caagatgccattgacgaatacaaggctagagaggctgcagcaatggttcaagggaagact
gttgatttccagcgcaagaaaagcaaagggagtctcaggaagcttgatcagcagcctgag
tggttgaaagggggcaatcttcgagattatcagcttgaaggcctgaacttcttggttaac
agctggagaaatgatactaatgtaattctagctgatgaaatgggtcttggtaaaactgtc
caatcagtttcaatgcttggtttcttgcagaacgctcaggaaattcaaggaccatttctt
gttgttgttccgctatctactttgtcaaattgggcaaaagaatttagaaagtggttgcct
gacatgaatgtcattatatatgttggaacacgtgctagccgtgaggtgtgccagcagtat
gagtttttcaatgaaaagaaaacaggcaggagtataaaatttgataccctgttaactaca
tatgaagtgttattgaaggataaggctgttctgtctaaaattaagtggaactatcttatg
gttgatgaagctcatagattgaagaatagtgaggcatctttatatacaacattatcggaa
ttcagcacgaagaacaagttgctaattactggcactcccctgcaaaacagtgttgaggag
ctatgggctttgcttcattttcttgatcctgacaagtttaggagtaaggatgattttgtt
cagaagtacaagaatcttagttcattcaatgagatggagcttgctaatcttcacatggaa
ttgagacctcacattctcagaagagtcataaaagatgtagagaagtctttgcctcctaaa
attgagcgcatccttagggttgagatgtcaccactgcagaaacagtattataagtggatt
ctggaacgaaacttccatgatttgaataaaggagttcgtgggaatcaggtatcactttta
aatattgtggtggagttgaagaaatgctgcaaccatccatttctgtttgaaagtgcagac
catggttatggtggcgatacaaatttcctaggcagcacaaaactggaaaggattatttta
agtagcgggaagctggttatactagataagctgcttaacagattgcatgagacaaatcac
cgggtgttaatattttctcagatggttaggatgttggatttactggcggagtatctctct
ctaaaagggttccagtttcagagacttgatggtagtacaaaggctgagttacgtcagcag
gctatggatcattttaatgctcctggaagtgaggatttctgtttccttctttcaactcgt
gctggtggcttgggtattaatcttgcaactgcagacacagttatcatatttgattcagat
tggaatccgcaaaatgatctacaggcaatgagccgagctcatagaattgggcagcaagaa
gtagttaacatttatcggtttgtcactagcaagagcgttgaagaagatatcttggagcgt
gccaagaagaagatggttctggaccatttagttatccagaagctgaatgcagagggcaga
ctggagaaaaaggaagcgaaaaaaggaagttcttttgataaaaatgagctttcagcaatt
ctgaggtttggggcagaagaactctttaaggaagacaaaaatgatgaggaaagcaagaaa
aggcttcttagtatggacatcgatgagattcttgaaagagcagagaaagtagaagacaaa
gtaaatgaaggagaggaaggacatgaattgttgagtgcttttaaggtggctaatttctgt
agtgccgaggatgatggaacattttggagccggatgataaagccagaagccattgcacaa
gctgaggatgctttagctccccgagcagcacgaaatattagaagttatgcagaggctata
ccacccgaaaggagtactaataaaaggaaaaagaagggagttgaacctcaggaaagattg
tcgaagcgacgcagggcagattcgggttactctcttccagtccttgagggtgctactgct
caagtgagaggatggtcttacggaaacttacccaaaagagatgcaacacggttttttcgt
gcggttaagaagtttggaaatgatagccagataagcttgatagctgcagaagttggtgga
acagttgaagctgctccaactgaagctcaaattgagctatatgacgcattaattgatggt
tgtagagaagcagttaaaggagagactctggacccaaagggtccgcttttggatttcttt
ggcgttcctgtaaaggctgatgaggtgttaagccgtgttgaagaacttcagctccttgcc
aagcgaattagccggtatgaagatcctatctctcaattcagagcacttggatatctcaaa
ccatccacatggtctaaaggttgtggatggaaccagaaggatgatgcaaggctgctgctt
ggaattcactatcatggatttggcaattgggaaaagataagattagatgaaaaactcggt
cttactaagaagattgcccctgtggaactccaacatcatgaaactttcttaccgcgagcc
ccccaactgaaagaacgagctacacagcttttggaaatggaagttgcagctgttggtggg
aagaattctaacgtgaaagttggacggaagaatgcaaagagacagaaagaaacttttatg
acatcacgtggaaggggcagacaagggaagcctggttctccaagtgtgaatgttcaagct
aacagaaaaagagctccaaaatcccagaagattgagccgttagttaaagaggaaggtgaa
atgtctgacaatgaagaagtttatgagcagttcaaggaagtaaaatggagggaatggtgt
gaagatgtcatgatagatgaggaaaagactctaaaacgtcttcaaaaactgcagtctacc
agtgcagatctgccgaaggaaaaggtgctttccaaaattcggaattacttgcagcttatt
ggtcgaaggattgaccaaattgtttcagaatacgagcaggagtcttacaggcgaggaagg
atgaccacacgattatggaattatgtatctaccttttcgaatttatctggtgagagactt
caacaaatttattccaaacttaaacaggagcaacaggtggctggtgtgggaccatcccat
attaatggctctgctcctggacatcaaacagcagcatttacacatagggatcttgatgtg
ggtaaatttgaagcttggaaacggagaaaaagagctgaagcggatgcttcccatatccag
catccacatcaaagaccttcaaataatgggacatggttacctgatccgaactcttcaggg
attcttggaccaccaccatctgatggcagacaattcagtaatgggaggccttacaggatg
caaccggctggcttccctccgagacagggtttctcatctggtatcaagtag
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integrated database retrieval system
