KEGG   Sesamum indicum (sesame): 105170993
Entry
105170993         CDS       T04135                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit 4-like
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03020  RNA polymerase
sind03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    105170993
  09124 Replication and repair
   03420 Nucleotide excision repair
    105170993
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sind03021]
    105170993
   03400 DNA repair and recombination proteins [BR:sind03400]
    105170993
Transcription machinery [BR:sind03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     105170993
DNA repair and recombination proteins [BR:sind03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      105170993
SSDB
Motif
Pfam: RNA_pol_Rpb4 TRF DUF5100 L_PA-C-like DUF7293
Other DBs
NCBI-GeneID: 105170993
NCBI-ProteinID: XP_011090278
UniProt: A0A6I9TVY9
LinkDB
Position
LG9:7234750..7238114
AA seq 138 aa
MSVEEEENAAELKIPDEFLKAKCLMNCEVALILEHKYEQLQQMADDPMNQMSQVFEKSLQ
YVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAHD
DEAIEKMLNDLSLIKKFE
NT seq 417 nt   +upstreamnt  +downstreamnt
atgtcggtggaagaagaggaaaacgcggccgagctcaaaatcccagatgaatttttgaag
gccaagtgtctaatgaactgtgaagttgctcttattcttgaacataagtatgagcagctt
caacagatggcggatgacccaatgaatcaaatgtcacaggtttttgaaaaatcactccaa
tatgtgaagcgctttagccgatataagaatccggatgctgtcagacaagttcgagaaatt
ctgagtagatatcagctggctgaatttgagctctgtgtacttgggaatctttgtccagaa
acggtggaggaagccatagccatggttccgtcaatcaagacgagaggacgagctcatgat
gacgaggcaattgagaaaatgttgaatgacctctctctgatcaagaaatttgaatag

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