Sesamum indicum (sesame): 105171032
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Entry
105171032 CDS
T04135
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105171032
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105171032
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
105171032
mRNA degradation factors
5'-3' decay
Decapping complex
105171032
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
105171032
NCBI-ProteinID:
XP_011090329
UniProt:
A0A6I9TW42
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Position
LG9:complement(7530376..7537035)
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AA seq
367 aa
AA seq
DB search
MSHNGKLMPNLDEKSTKLLNLTVLQRIDPFVEEILITAAHVTFYEFNIDTSQWSRKDVEG
SLFVVKRNTQPRFQFIVMNRRNTDNLVENLLGDFEYEVQVPYLLYRNASQEVNGIWFYNP
RECEEVANLFSRILNAYSKVPTKSKVSPTKSDFEELEAVPTLAVMDGPLEPSSSTTSSIA
DVPDDRSFVNFFSTAMNIGSAPNVAIAGQPYHSSATAVSAHPQSALPTLPSAQAPATLST
STPIMSILDNPEANAATKRSTDLVKPSSFFGPHPSSSPLIIPAITSSVPTAPPLNPPGNV
QRPYGAPLLQPFPPPTPPPSLTPTSVPTPNYGPVISREKVREALQMLVQDNQFIDMVYQA
VLNAHQS
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcacaacgggaaattgatgcccaatctggatgagaagagcaccaagttactcaat
ttgacggtgctacagagaatcgatccctttgttgaggaaattctcatcaccgccgcacac
gtcaccttctacgaatttaacatcgatactagccaatggagtcggaaggatgtggagggc
tctctttttgtcgtgaaaaggaatactcaaccgcggtttcagtttatagtaatgaatcgt
cggaatactgataatctagtggagaatctcttgggagattttgagtatgaagtgcaggtt
ccatatttattataccgaaatgcttctcaagaggtgaatggaatatggttctacaatcca
cgtgagtgcgaagaggttgcaaatctatttagtaggatacttaatgcatattccaaggtg
ccaacaaagtcaaaagtatctccaacaaaaagtgactttgaagaactggaagcagttcca
acactggcagtaatggatggtccgctagagccatcatcttctactacctccagtatagcg
gatgtaccggatgatcgatcttttgtgaacttcttcagtactgccatgaatattggaagt
gctccgaatgtagcgattgctgggcagccataccattcatctgcaactgcggtttctgct
catccacagagtgcgctgcccactttaccatctgcccaagcaccagccactttatctact
tctacccctatcatgtctattctcgacaaccctgaagctaatgctgctacaaagcgctca
acggatctggtaaagccgtcatccttttttggtccacacccttcctcttccccgctgatt
atacctgctataacttcatccgttcccactgcccctccgctgaatcctcctgggaatgta
caacgaccatatggtgcacctttgcttcagccgtttccaccaccaacacccccaccatca
ctgactccaacttctgttcctacaccaaattatgggcctgttataagcagagaaaaagtc
agggaagcgcttcaaatgcttgttcaggataatcaattcattgacatggtttaccaagca
gtgctgaatgcgcaccagtcatga
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