Sesamum indicum (sesame): 105171334
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Entry
105171334 CDS
T04135
Name
(RefSeq) ATP-dependent DNA helicase 2 subunit KU80 isoform X1
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
105171334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sind03400
]
105171334
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
105171334
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_PK_bind
Ku_N
Ku_C
Motif
Other DBs
NCBI-GeneID:
105171334
NCBI-ProteinID:
XP_011090712
UniProt:
A0A6I9TUT7
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Position
LG1:complement(17046516..17053319)
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AA seq
708 aa
AA seq
DB search
MLLVHLYSMSLEGLVLVLDVGPSMHALLPEIEKVCSMLVQKKLIYNKYDEVGVVVFGTAD
TKNDLTVEVGGYENVMVLRDVKVVDGDLIEAVQQLPRGSAHGDFLDAIVVGMDMLIKKYG
PTNKGKKRLCLITNALTPIKDPYEGSKEDQVNTVAAQMMTHGMKMDCIIIRANQDWGVRK
EIVKENDFLLDVFSTRSSSKKVYVESATSLLGALRTRNISPVTIYRGDFELSSKLKIKVW
IYKKTSEEKFPSLKKYSDKAPPTDKFATHEIKVDYEYKSIEDPNRVVPPEQRIKGYRYGP
QVVPISSAEWEAVKFKPEKGVKLLGFTDVSNIMRQYYMRDVNIFIAEPGNTKATLAVSAL
ARAMKDMDKVAIIRCVWRQGQANVVVGVLTPNVSEKDNIPDSFYFNVLPFAEDVREFQFP
SFSNLPPSVQPNEQQQQAADKLVQMLELAPSGKEEALQPNLTPNPVLERYYRSLELKSKD
PDAAIPPLDETLRKITEPDAELLYQNRAVIEEFRTSFELKENPKLKKSSRRVLREKPSGS
SEEGEGVSDVGQAMDAIEYTSNVKVGKIGDSNPVQDFEAMISRRDSPQWITKAIQSMKDK
IFDLVENSFEGDTYEKALECLGALRKGCILEQEPKQFNDFLHHLHKFCQEKNLSSFSEYL
MSHEMMLISKNEAPESDVPEHEARLLTVKKEPKAEQDPETVPLDVGRL
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgttgttggtgcatttgtactcgatgtctttggagggccttgttctggtgctcgatgtt
ggtccatctatgcatgctctgctgccggaaatagaaaaagtttgttctatgctagtacaa
aagaagctcatctacaacaagtatgatgaagtgggagttgtcgtatttggtactgcagat
actaaaaatgacttgacagtggaagtgggtggatacgaaaacgtgatggttttgcgggat
gtaaaggttgtagatggagatctcattgaagctgtacaacaacttcctcgaggaagtgcc
catggtgactttcttgatgcaattgttgttgggatggatatgctgattaagaagtatggg
ccaactaacaagggaaagaaacgtttatgtctcatcaccaatgcacttactccaatcaaa
gatccatatgagggatcaaaggaggatcaagtaaacacagttgctgcacagatgatgacg
catggtatgaagatggattgcataattattagagcaaaccaagattggggtgtgagaaag
gagattgtgaaagagaatgatttccttttagatgtattttcaaccagatcttcttcaaag
aaggtgtatgttgagagtgcaacttcacttttaggtgcattaagaactcgtaacatatcg
ccagtcactatatacaggggtgattttgagctgagctccaaactgaagatcaaggtatgg
atctacaagaaaacatctgaagagaaatttccctctttgaaaaagtattctgataaagca
cctccaacagataagtttgccactcatgaaatcaaggttgattatgaatacaagagtatt
gaagatccaaacagagttgtaccacctgaacaaaggatcaaaggctaccgctatggtcct
caagttgtccctatatcatctgctgagtgggaagctgtgaagttcaaaccagagaaaggt
gtaaagcttctaggctttacagatgtttcaaatatcatgagacaatattatatgagagat
gtgaacatcttcattgctgaacctggaaatacaaaggccacactcgcagtctcagcatta
gcaagagcaatgaaagatatggataaagtagctattatccgctgtgtttggagacaagga
caggcaaatgttgttgtgggagtcctaactcctaatgtatcagaaaaagataatattcca
gattcattttatttcaatgtgcttccttttgctgaagacgtgagggagttccagttccca
tctttcagcaatctccctccatcagtgcagccaaatgaacagcagcaacaggctgcagat
aagttggttcaaatgcttgagcttgctccatctggcaaagaggaagccttgcaacccaac
ctcacacccaatcctgttcttgagcgttattatcgttcccttgagctgaaatcaaaggac
ccagatgctgctatccctccacttgatgagaccctcagaaagataacagaacctgatgcc
gaacttctttatcaaaacagagctgtgattgaggaattccgtacgtcatttgaactcaaa
gagaatccaaagctgaaaaaatcatcccgaagagtattaagagaaaaaccttctggatca
agtgaggaaggagagggtgtaagtgatgttggtcaagccatggatgctattgaatataca
tccaacgtaaaagtcggaaaaataggggattcaaatcctgttcaagattttgaagccatg
atatctcgtcgagatagtccacaatggattacaaaagctattcagagcatgaaagacaag
atatttgatctagttgagaactcttttgaaggagacacctatgagaaagcactggagtgt
ctaggtgctctccgcaagggttgcattctggagcaggaaccgaagcagttcaatgatttt
ttgcatcatctccataaattctgccaagagaaaaacctcagtagcttttccgaatatttg
atgtcacacgagatgatgttaataagcaagaatgaagcaccagagagtgatgttccagag
catgaagccagactcttaaccgtgaaaaaggagccgaaggctgagcaggatcctgagaca
gtacccctcgatgtcgggcggttgtaa
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