Sesamum indicum (sesame): 105171456
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Entry
105171456 CDS
T04135
Name
(RefSeq) LEC14B homolog
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105171456
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
105171456
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Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
PROPPIN
WDR54
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
105171456
NCBI-ProteinID:
XP_011090881
UniProt:
A0A6I9U0E0
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Position
LG10:1084506..1089238
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AA seq
471 aa
AA seq
DB search
MSRSGRYFDFGDCVSEPGGSSRNVLLGCCDDEFSQLTKLRSAPHERLSRSLPGKGRLPVS
PVKMLLGRECNYSARGRFSLSDSCHVLSRYLPVCGPSVIDKMKSCAYVSQFSADGSLFVA
GFQESHIRIYNVDLGWKVHKDIRARSLRWTITDTSLSPDRRFLVYSSISPVVHIVDVGSG
TKESHANVTEIHEGLEFSSNVSDYEDYSFGIFSVKFSTDGREIVAASSDESIYVYDLDAR
RLSLRIPAHMSDVNAVCFADESGHIIYSGSDDTLCKVWDRRCFAARGQAAGVLIGHLEGI
TFVDTRGDGRYFISNGKDQAIKLWDIRKMSSNINYIPKRRYAEWDYRWMEYPEEARNFRL
PEDLSLATYRGHSVLRTLIRCYFSPACSTGQKYIYTGSTDSSVYVYDVVSGAQVAKLDFH
EDPVRDCNWHPFYPMIVSSSWDGMIAGWEFPGNGQNQAPVKRTRRRRRFLY
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggtctggaaggtattttgattttggtgattgtgtaagtgagcctggaggatca
tctagaaatgtgttgcttggttgttgtgatgatgagttcagtcaactcacaaagcttagg
tcagccccacacgagcgtctgagccgttcgttgcctggcaagggaagattacctgtttcc
ccggtgaaaatgctgctgggcagggaatgtaactatagtgcaagagggaggttctctttg
tcagattcttgtcatgtcttgagcaggtatttacctgtttgtggtccttctgtgattgat
aagatgaaaagttgtgcatatgtctcgcaattttctgccgatggatctctatttgtcgca
ggatttcaggaaagtcatattagaatatataatgttgatctgggatggaaagttcataaa
gacattcgggccaggagcttgaggtggactattactgatacttctctttcaccagatcgc
cggtttcttgtttattcaagtatctcccctgttgtccatattgttgatgttggatctggt
acaaaagagtctcatgcaaatgtgacggaaattcatgaaggtctggaattttcatctaat
gtcagtgattatgaggattattcttttgggatcttctccgttaaattttcaactgacggc
cgagaaattgtggctgctagcagtgatgagtcaatatatgtttatgatctcgacgccaga
aggctaagcctcagaatccctgctcatatgtctgatgttaatgctgtatgctttgccgat
gaaagtggccacatcatatattcgggcagcgatgataccctctgcaaagtttgggacagg
cgttgctttgcagccagggggcaagctgctggagtcctgatcggccatttggaaggcatt
acattcgttgatactcgtggagatggccgttacttcatctcgaatggaaaagatcaagcc
attaaactttgggatataaggaaaatgtcatctaacatcaactacatcccaaaacgtcga
tatgctgaatgggattaccggtggatggaatatccagaagaggcaagaaactttaggctt
cctgaggacctgtcactggccacatacagaggccatagtgttttgcgtactctcattcgc
tgctatttctcgccagcatgcagcactggccaaaagtatatatacaccggatcaaccgat
tcctccgtttatgtttatgatgtggtgagtggtgctcaagtagcaaaactcgatttccat
gaggatcccgtaagagactgcaactggcaccctttctaccctatgattgtaagctcctcc
tgggatggaatgattgccggttgggaatttccaggcaacggccaaaaccaggcaccagtg
aagcgaactagaagacgacgacgatttctctactaa
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