KEGG   Sesamum indicum (sesame): 105171685
Entry
105171685         CDS       T04135                                 
Name
(RefSeq) putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3
  KO
K15505  DNA repair protein RAD5 [EC:5.6.2.-]
Organism
sind  Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:sind00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sind03400]
    105171685
DNA repair and recombination proteins [BR:sind03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    105171685
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C HIRAN zf-C3HC4_3 zf-C3HC4 zf-RING_UBOX DEAD zf-RING_2 zf-C3HC4_2 ResIII Prok-RING_4 zf-C3HC4_4 RING_XB3-XBAT31 UBA_RAD5A zf-RING_5 zf-ANAPC11 zf-RING_4 zf_C2H2_ZNF598
Other DBs
NCBI-GeneID: 105171685
NCBI-ProteinID: XP_011091178
UniProt: A0A6I9TVQ9
LinkDB
Position
LG10:complement(2288386..2295395)
AA seq 1165 aa
MEAESAEEKESEVKAIVGSGTSETDIRSVLSQCGNNHRAATDLIVHSPSTLSLTPHFTAQ
KTLTSVGVRISTVQMNLSKDVEESEKKPCDELSTVKQEPLSVENGSEGEREKGVMKKCGT
GVGLKGSARVNEECDVGFVKGEVYGEENQVLSGEKSSATVGSRRLSFEEWLSLHHPGKKQ
EEKQGITGGANAEVRVKEEPNVDTESKTLILVKEEAKEVISVQPLSARKLSDDEYRRIQS
GHINTKPKRARVEEMSLSSLVIEDGDFPEEPDWLLVGRTVITGLSTTKGRKLENNEIVHF
AFPNADVRSKSSSHFMSAKASNAASAIVRFSTKRFGEIGRLPMEWAKCLVPLVNSSKVKV
LGRCIAAPVDLHLMQEIMLYVSFYIHHSVFLEGDKSSWKLEPTNIDATTYPLLTLFKLLK
VKPSQKAEFTPDDLDSRKRSLKLDDDSDDTAAVLPLVKKRKGCQLQDQNKDEQAITETSL
NKLVGAVDMYNLEEMEPPETLTCDLRPYQKQALYWMSELETGASAEETEKTLHPCWAAYR
VCDERAPAIYVNMFSGEATTQFPSATQMARGGILADAMGLGKTVMTIALILARRGRGTRV
DQQVITEGETKIEHIKISQTTEASKKANGGTLIVCPMALLGQWKDELETHSKPDSISVFV
HYGGERANDPKVIAEPDVVLTTYGVLTSAYKNDSINSIFHQVEWYRVVLDEAHTIKSSKT
QGAQAAFGLSSYCRWCLTGTPLQNNLEDLYSLLCFLHVEPWCNWAWWNKLIQRPYENGDK
RGLKLVKAILRPLMLRRTKESKDKEGRPILVLPPTDIQVVECEQSEAEHDFYGALFKRSK
VQFDQFVAQGKVLHNYANILELLLRLRQCCNHPFLVMSRGDTQEYADLNKLARRFLQSHP
DSTSQTGPSRAYVEEVVEGLRNGENAECPICLESADDPVLTPCAHRMCRECLLSSWRSTV
VGLCPICRQVLSKTELITCPTASRFRIDVEKNWKESSKISKLLDCLEHMRNSGSGEKSII
FSQWTSFLDLLEIPLKRRNFGFLRFDGKLAQKQREKVLHEFAETKHKRILLMSLKAGGVG
LNLTAASNVFLMDPWWNPAVEEQAIMRIHRIGQKRIVRVRRFIVKDTVEERMQQVQARKQ
RMIAGALTDEEVRSARIEELKMLFR
NT seq 3498 nt   +upstreamnt  +downstreamnt
atggaagcggaatcagcggaggaaaaagaaagtgaggtgaaagcgatcgttggttctgga
acctcagaaaccgacatccggagcgttctgtctcaatgcggcaacaaccatcgtgcagcc
accgatctcattgtgcattcaccttcaacgctttcgctaacgccccatttcactgcgcag
aaaactctcacttctgtgggtgtgaggatctcaactgtccagatgaatttatcgaaggac
gttgaggagtccgaaaagaaaccgtgtgatgagttgagtacagtaaagcaagagccgttg
agtgtggaaaatggttcagaaggcgaaagagagaagggtgttatgaagaagtgcggaacg
ggtgttgggttgaaggggagtgcgcgtgtgaatgaagaatgtgatgtgggttttgtgaaa
ggtgaggtttatggagaagaaaaccaggttttaagtggtgaaaaatcatctgcaacggtg
ggaagtcgtaggctgagttttgaggagtggttaagtttgcatcatcctggaaagaaacaa
gaggaaaaacagggtataactggtggtgccaatgctgaggttagagttaaagaggagcct
aatgtagatacagagagtaaaactttgattctagtaaaggaagaagcgaaggaggtgatc
agtgtacagccattgagtgcaagaaaattatctgatgatgagtatagaaggatccaatct
gggcatattaacactaagcctaaaagggcgagggtagaagaaatgagtttaagttctctg
gtgattgaggacggggattttccggaggagcctgattggttgttggtggggaggacggtg
attacagggctctcaaccacaaaagggagaaaattggagaacaatgagatcgtacatttt
gcttttccaaatgctgatgtgaggagtaagagtagttctcattttatgagtgcaaaggct
tctaatgctgcctctgctattgttcgtttctcaacaaaaagattcggagagattggccgt
ttaccgatggaatgggcaaaatgccttgttccacttgtaaattcatcaaaggtgaaagtt
cttggtcgttgtatagctgctccagttgatcttcatcttatgcaagagattatgttatat
gtcagcttctacattcatcattctgtctttctggaaggagataaatcatcttggaagttg
gagcctacaaatattgatgccaccacatatcctctcttaacattgtttaaactgctgaaa
gtcaagccatctcaaaaggcagaattcacaccagatgaccttgattctcggaagcgctca
ctaaaattagatgatgattcagatgacactgcagcagttttgcccttggtgaagaagaga
aagggttgtcaacttcaagatcagaacaaagatgagcaagctattactgaaacatccttg
aataagcttgttggtgctgtagatatgtataacttagaggaaatggagcctccagaaact
cttacttgtgatttaaggccataccagaagcaggcactttactggatgtctgaattggag
acaggtgcaagtgcagaagaaacagagaagactcttcatccatgctgggcagcttatcgt
gtgtgcgatgagagagctccagcaatttacgtgaatatgttttctggggaagcaaccaca
caatttccttctgccacacagatggcaagaggagggattctggcagatgcaatgggtctt
gggaaaaccgtgatgacaattgctttgatactggcaagaagaggtcgtggtacccgagta
gatcaacaagtaatcactgaaggggaaaccaagattgaacatattaagattagccagacc
actgaagcttcaaagaaagcaaatggtggcaccctcattgtttgtccaatggctttactc
ggccaatggaaggatgagcttgaaacccattcaaagccagacagcatttctgtttttgtt
cattatggtggggaaagagccaacgaccctaaggtgatagcagaacctgatgtggtcttg
accacatatggtgtgctgacctcagcatataaaaatgattccattaacagcatattccac
caagttgaatggtatcgtgtggtgttagacgaagcccacacaattaaatcatcaaagact
caaggtgctcaggctgcatttggactgtcctcatattgccgctggtgtcttactggcact
cctcttcagaataatttggaagacctgtacagcctcttgtgcttcttgcatgtcgaacca
tggtgcaactgggcatggtggaacaagttgattcagaggccttatgagaatggtgataag
agaggtctgaaattggttaaggcgattctgaggccactaatgctgaggagaacaaaggag
tccaaggataaagaaggaaggcccattcttgttctcccaccgactgatatccaagttgtc
gaatgtgagcaatcagaagccgagcatgacttttatggtgctctctttaagagatcaaaa
gttcaattcgaccaatttgttgctcaaggcaaagttctccataactatgcaaatattctt
gagctgttactacgactgaggcaatgttgcaaccatccattccttgttatgagccgaggt
gatacacaagaatatgcagacctgaacaagctagcaagaaggttccttcaatcccaccct
gattcaacgagccagactggcccgtctcgagcatatgttgaagaagtcgtggagggtctt
cggaatggtgaaaatgcagaatgccccatttgcctcgagtctgctgatgaccctgttttg
acaccatgcgcacataggatgtgcagagagtgccttctatcaagctggcgaagtacagtt
gttgggctctgtcccatctgtcggcaggtgctcagcaaaaccgaactcatcacatgtccc
actgcaagcaggtttagaattgatgttgaaaagaactggaaggagtcatccaagatatcc
aagctcttggattgcttggaacacatgcgcaactcgggttctggtgaaaagagcatcatt
tttagccagtggacttcattcttggatcttttagaaattccactcaagaggagaaatttt
ggattcttgaggtttgatgggaagttggcgcagaaacaaagggagaaggtcttgcatgag
tttgctgagactaaacacaaaaggatactattgatgtcacttaaagcaggtggtgtgggc
ttgaacttgactgctgcttccaatgtctttctaatggatccatggtggaatcctgcagta
gaggagcaagccatcatgagaattcatcggattggccaaaagcggattgttcgtgtccgg
agattcatcgtcaaggatacagtagaagagcgtatgcaacaagtccaagcgaggaagcaa
aggatgatagccggagccctaaccgatgaggaagtccggtcggcgagaattgaggaactt
aaaatgcttttccgttaa

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