Sesamum indicum (sesame): 105171749
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Entry
105171749 CDS
T04135
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105171749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105171749
03036 Chromosome and associated proteins [BR:
sind03036
]
105171749
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105171749
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105171749
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
105171749
NCBI-ProteinID:
XP_011091302
UniProt:
A0A6I9UB49
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All DBs
Position
LG1:complement(1660961..1667089)
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AA seq
710 aa
AA seq
DB search
MPGVTSDSGELNSLSVVPHTLDTQKPRVYPLRLHRVTRPLARLSISWARGNTLRVSLLQT
DDAASEQTPGGEVVEVKLGSADAGEIPEAQWRRIAYGSVAPFALLQSRKNSMDALHYEKD
WWEHVMEYSKEINSLLGNTKSSVPPTIEDPKTVLKKVEEPTSLKAAWELMEMFYADKQSQ
TWIPERLLDWLADFDCLFSGTQPTVHAKLVSFQNKLVTIQAVENHPEYWEIMSSALAVGW
LDVVVKLLRLHGSYLFDQLGSREIENGLVEAVALLISEMPRLRPDMPTEKIGECYSTKPE
FMKAWEKWRAKITKLDCSAFWLQCDHQQTRVGLKNMLQVMLGNASVLSNVTYHWIELYIS
HFLYVRPFTVGLESMYSLAQKCMHLKPISYRHKLMGLIIGILEENTEVVLAECSRSFGPW
MTTHAIELMAAGSTQAETLLHEEQSKIGGICIEELHRLTYAQILSSHALTWNIAPIYLTS
CLKQGLGLLENLLYKQPVQHHLVLLKSMEICRLNGLDYVSYNMMKIAGVHYWKHGKKGSA
VFWLQQARDEVRLNRIAKHLFDFVGKSVSDESFKQWEGMIELLGTESKTAGGLEFLKKYR
DFRRSLQQVQEGITTDAARKAAEALISLMRNPSTPQQFWLPLLYDSLKLLNWQEGPLLNV
SQTNLLLNKLQELSLARLLPGFVDAGLPPEALQSVRLALATNLGRAILEE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgcccggcgtgacgtcagattccggagaattgaactctctctccgtcgttccgcacacc
ctcgatacacaaaaaccaagagtttaccctctacggctccaccgcgtcacccgtccactt
gcccgcctctccatctcctgggcgcgtggaaacacgctccgcgtgtctctcctgcaaacc
gatgacgctgcctctgagcagactcctggtggagaagtggtggaagtgaagctcggcagt
gctgatgcaggagaaatccccgaagcgcagtggcggagaattgcatatggctcagtcgcc
ccctttgcgcttcttcaaagcagaaagaattcaatggatgcgttgcactatgaaaaagat
tggtgggaacatgtaatggagtacagcaaggaaataaattctcttcttggtaatacgaag
tcatctgttcctccaaccattgaagacccaaagacagtacttaagaaagttgaggagcca
acctctttaaaagctgcctgggagctgatggaaatgttttatgccgacaagcaatctcag
acttggatccctgaacgccttcttgattggttagctgattttgattgtctgttctctgga
actcagccaactgtacatgccaaacttgtgtctttccagaataaacttgttaccatacag
gcagttgagaatcatccagaatattgggaaattatgtcatcagctttagcagttggctgg
cttgatgttgttgtaaaactattgcgcttgcatggatcttatctgtttgatcagctagga
agtcgtgagatagaaaatggacttgtagaagcagttgctcttcttatatcagagatgccg
cgtctgcgccctgatatgcccacagaaaaaataggagaatgctacagcactaaacctgag
ttcatgaaggcatgggagaagtggcgagctaaaattacgaagttggactgcagcgcattc
tggcttcaatgtgatcaccagcagactagagttggacttaaaaatatgcttcaagtcatg
ctgggaaatgctagcgttctctccaatgtaacataccactggatagagctctatatttcc
cactttttgtacgtcaggcctttcactgtgggattggaaagcatgtatagcctggctcag
aaatgcatgcatttaaaaccaatttcctatcgccataaactgatgggacttataattggg
attctagaagaaaatacagaggttgttctagcggaatgctcaagatcatttggcccctgg
atgacaacccatgctatagagctgatggcagctgggagcactcaagcagaaacacttttg
catgaagagcagtctaaaattggagggatctgtatagaggagctccatcgacttacttat
gcccaaattctatcctctcatgccttgacatggaatattgcacctatttatttgacatca
tgcttgaagcaaggactgggcttgttagagaatctattgtacaagcagcctgtacaacat
catctggtgttactaaagagcatggagatttgccgtctcaatggacttgactatgttagt
tacaacatgatgaagattgctggagttcattactggaaacatggcaagaaaggttcagct
gtcttctggcttcagcaagctcgagatgaagttcgcttaaaccgaattgccaagcattta
tttgattttgttggaaaatcagtttctgatgaaagtttcaagcaatgggaaggaatgatt
gaattgttggggactgaatcaaaaactgctggcgggcttgagttcttgaaaaagtatagg
gatttcaggcgatcccttcagcaagttcaggagggaatcaccactgatgctgctaggaaa
gctgcagaagcacttatatcactgatgagaaacccttctacacctcagcagttttggcta
cctctcttatacgactcactgaaattgctgaactggcaggagggtcccttgcttaacgtt
tcacagactaaccttttgttgaataaattgcaagagttatcattggcaagattgctgcca
ggatttgtggatgctggcttgccacctgaggccttgcaatctgtcagactggctcttgcc
actaacttaggacgtgctatccttgaagagtaa
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