Sesamum indicum (sesame): 105171838
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Entry
105171838 CDS
T04135
Name
(RefSeq) chaperonin CPN60-2, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
105171838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105171838
03110 Chaperones and folding catalysts [BR:
sind03110
]
105171838
03029 Mitochondrial biogenesis [BR:
sind03029
]
105171838
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sind04147
]
105171838
Enzymes [BR:
sind01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
105171838
Messenger RNA biogenesis [BR:
sind03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
105171838
Chaperones and folding catalysts [BR:
sind03110
]
Heat shock proteins
HSP60 / Chaperonin
105171838
Mitochondrial biogenesis [BR:
sind03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
105171838
Exosome [BR:
sind04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105171838
Exosomal proteins of other body fluids (saliva and urine)
105171838
Exosomal proteins of breast cancer cells
105171838
Exosomal proteins of colorectal cancer cells
105171838
Exosomal proteins of bladder cancer cells
105171838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
105171838
NCBI-ProteinID:
XP_011091383
UniProt:
A0A6I9U3V9
LinkDB
All DBs
Position
LG10:3508052..3512875
Genome browser
AA seq
575 aa
AA seq
DB search
MYRFATNLAGKARLARNSSQQVGSRWGWSRNYAAKDIRFGVEARALMLKGVEELADAVKV
TMGPKGRNVVIEQSWGAPKVTKDGVTVAKSIEFKDKVKNIGASLVKQVANATNDVAGDGT
TCATVLTRAIFMEGCKSVAAGMNAMDLRRGITMAVDAVVTNLKSRARMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIQDGKTLFNELEVVEGMKLDRGYISPYFITNQK
NQKCELDDPLILIHEKKISSINAVVKVLELALKRQRPLLIVAEDVESDALATLILNKLRA
GIKVCAVKAPGFGENRKSSLQDLAVLTGGQVITEELGMNLDDVELDMLGSCKKVTISKDD
SVILDGAGEKKSIEERCEQIRSAIELSTSDYDKEKLQERLAKLSGGVAVLKIGGASEAEV
GEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKELEKLPTANFDQKIGVQIIQNALKT
PVYTIASNAGVEGAVVVGKLLESDNPDLGYDAAKGEYVDMVKAGIIDPLKVIRTALVDAA
SVSSLMTTTEAIVVEQPKDEKPAPPMGGGMGEMDY
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtatcggtttgcaacaaatcttgccggaaaagccaggcttgcaagaaacagcagccaa
caggttggtagtagatggggttggagcagaaactatgctgcaaaagacattagatttgga
gtggaggcaagggcattgatgcttaagggtgttgaagagcttgctgatgcagttaaagtt
actatgggtcctaaggggcgtaatgtagtgattgaacaaagttggggtgcccctaaagtt
acaaaggatggcgtgacagttgcaaagagcattgaatttaaggacaaagttaagaacatt
ggtgcaagccttgtaaaacaggttgcaaatgctacaaatgatgttgctggtgatggtact
acctgcgccactgtcctcactcgcgcgatatttatggaaggctgcaagtcagtggcggct
ggcatgaatgctatggatctcaggcgtggtattactatggctgttgatgctgtggtcaca
aacttgaaaagcagagcgagaatgattagcacctcagaggagattgctcaggttggaact
atttctgccaatggagagagagaaattggtgagctgattgcaaaggccatggaaaaagtt
gggaaggagggtgtgatcacaattcaagatggaaagacattgttcaatgaattggaagta
gttgaggggatgaaacttgacagaggttacatttccccatacttcattacaaaccagaag
aaccagaaatgtgaattggacgatcctctaattctaattcacgagaagaaaatctcaagc
ataaatgccgttgtcaaagttctggaactggctttgaagaggcaaagacctcttctgata
gttgctgaagatgtggagagtgatgcacttgcaactcttatccttaacaagcttcgagct
ggaataaaggtctgtgctgtaaaagctcctggatttggtgaaaacaggaaatctagcttg
caggatcttgctgttttaacaggaggccaggtcataactgaggaacttggaatgaacctt
gatgatgtggagttggatatgctgggatcatgcaagaaggtcaccatatctaaggatgac
tctgttatacttgatggagctggtgaaaagaaatccatagaagaaagatgtgagcagatc
aggtcagcaattgaattgagcacttctgattatgataaggagaagttgcaagaaagactt
gccaaactttctggtggtgtagctgtgcttaagattggaggagctagtgaagcggaagtt
ggtgagaagaaggatagggtcacagatgctttaaatgccacgaaagcggcagttgaggaa
ggaatcgttcctggtggtggcgttgccctactctatgcatcaaaggaattggaaaagttg
ccaactgcaaactttgaccagaagattggtgttcaaattattcagaatgcattgaagaca
ccagtttatacaattgcatcgaatgctggagtagaaggtgccgttgttgttggcaagttg
ctggaatcagataatcctgatctcggatatgatgccgctaaaggtgaatacgttgatatg
gtcaaagctggaattattgatccgttgaaggttatcagaactgctcttgtagatgctgct
agtgtttcgtcattgatgacaacaacagaagccattgtggttgaacagcctaaagacgag
aagcctgcccctccaatgggtggcggcatgggtgaaatggattactga
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