Sesamum indicum (sesame): 105171845
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Entry
105171845 CDS
T04135
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind00040
Pentose and glucuronate interconversions
sind01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105171845
Enzymes [BR:
sind01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105171845
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
NosD
Motif
Other DBs
NCBI-GeneID:
105171845
NCBI-ProteinID:
XP_011091390
UniProt:
A0A6I9UBB7
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Position
LG10:complement(3586472..3591256)
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AA seq
509 aa
AA seq
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MSRGRYVGRSALFFFFSFPLSSSSSSFPSFVSLFAFWGSSDTHFCLEGEEESGSAVVMAM
GAGSKKWVVSLFSVLLFVLFVGAMARVHKDETPKLSEEVEKEQLQSSPNSTMAAKLGGID
EEGLNEHAVDDPEEVARMVEMATRNSTERRNLGFFSCGTGNPIDDCWRCDANWHKNRKRL
ADCGIGFGRNAIGGRDGRFYVVTDSGDDDPVNPKPGTLRHAVIQDRPLWIVFKRDMVITL
KQELIMNSFKTIDARGVNVHIANGACITIQFVTNIIIHGLHIHDCKPTGNAMVRSSPTHY
GWRTMADGDAISIFGSSHIWVDHNSLSNCADGLVDAVMGSTAITISNNYFTHHNEVMLLG
HSDSYVRDKQMQVTIAYNHFGEGLIQRMPRCRHGYFHVVNNDYTHWEMYAIGGSASPTIN
SQGNRYLAPTNPFAKEVTKRVDTAEGQWKGWNWRSEGDLMLNGAYFTPSGAGASASYARA
SSLGAKSSSMVASITSGAGVLACRRGHQC
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggccgttacgttgggcgtagtgctcttttcttcttcttctccttccctctc
tcctcttcctcctcctcatttccatcgtttgtttctctctttgcattttggggttcttct
gatacacatttttgtttggagggagaggaggagagtggaagcgccgtcgtaatggcaatg
ggggcgggttcgaagaaatgggtggtctctctgttttcggttctcctgtttgtgctgttc
gtcggagctatggctagagttcacaaagacgaaaccccaaaattgagtgaggaggtggag
aaagagcagttgcagagctcaccaaactcaacaatggcggcaaagttgggaggaattgat
gaggagggtttgaatgaacacgccgtggatgacccagaagaggttgcaagaatggtcgaa
atggccactagaaatagcaccgagaggcgtaacctgggatttttctcgtgtgggacgggc
aaccctattgatgactgctggcgttgtgacgccaactggcacaagaaccggaaacgactt
gctgactgtggtattggtttcgggcgcaatgcaattggtggtcgtgatggccgattctat
gtcgtcactgattctggtgatgatgaccctgttaaccccaagcctggcactcttcgtcat
gctgtcatccaggaccggcctctctggattgtgttcaaacgcgacatggttataacattg
aagcaggaactcatcatgaacagctttaagacaatagatgcccgtggagtgaacgtgcac
attgcgaatggagcgtgcattacgattcaattcgttaccaatattattattcacggcctc
cacatccatgactgcaaacctactggaaatgccatggtgaggagctcgcctacacactat
ggttggaggactatggctgatggagatgccatttctatctttgggtcgagccacatttgg
gttgatcataattcactctctaactgtgctgatggtcttgtggatgctgtcatgggatcc
actgccattaccatttctaataactacttcacccaccacaatgaggttatgttgttgggt
catagtgattcctatgtcagagacaagcaaatgcaggtgaccattgcttacaatcatttt
ggcgagggccttattcagagaatgccaagatgtagacacggatacttccatgttgtgaac
aacgattacactcattgggagatgtacgctataggcggaagcgcaagccccaccatcaac
agccaaggcaacagatatcttgcacctaccaatcctttcgcaaaagaggttacaaagagg
gtcgacacggctgaaggtcaatggaagggttggaactggaggtctgagggcgacctaatg
ctcaacggtgcctacttcactccatctggagccggagcatcagccagctatgccagagct
tcaagcttaggtgctaagtcttcctccatggttgcatctatcacttctggtgccggtgtt
cttgcttgccgccgcggccaccaatgctaa
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