Sesamum indicum (sesame): 105171898
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Entry
105171898 CDS
T04135
Name
(RefSeq) serine/threonine protein phosphatase 2A regulatory subunit B''beta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105171898
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sind01009
]
105171898
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105171898
03036 Chromosome and associated proteins [BR:
sind03036
]
105171898
Protein phosphatases and associated proteins [BR:
sind01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
105171898
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
105171898
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
105171898
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_8
EF-hand_5
P2R3B_EF-hand
DUF4187
Motif
Other DBs
NCBI-GeneID:
105171898
NCBI-ProteinID:
XP_011091457
UniProt:
A0A6I9TYV0
LinkDB
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Position
LG10:complement(4204851..4221815)
Genome browser
AA seq
539 aa
AA seq
DB search
MDLDFNGDVACLDAELLQLPEVSPLAIKANPYVAEKLFDQWLSLPETNSLVKCLLNNAKG
TGPLNFAGTSSSVNAAASNSLPSMFPAGSTPPLSPRSSSGSPRILKQRAGPSALGSPLKL
VNEPVKELIPQFYFQDGRPAPNELKERCLFRINQFFYGHMDGLQMHEFKPVTKEICKLPS
FFSTALFRKIDVDGTGVVTRDAFVDYWINGNMLTKDIATQLYTILKQPDLKYLVQNDFKP
VLRELLVTHPGLEFLQSTPEFQERYAETVIYRIFYYVNRSGNGRLTLRELKRSNLIAAMQ
HADEEEDINKVLRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHALTYRIVDRIF
SQVPRKFTSKVEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGVITRNEMQFFY
EEQLHRMECMAQEPVLFEDILCQIVDMIHPEDESYFTLHDLKGSKLSGSVFNILFNLNKF
MAFETRDPFLIRQERENPHLTEWDRFAHREYIRLSMEEDTEDASNGSADVWDESLEAPF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atggatttggattttaatggcgatgtcgcgtgcctcgatgccgagctcttgcagcttccg
gaggtctctcctttggcgatcaaagccaacccgtatgttgccgaaaagctttttgatcag
tggctttcgcttcctgaaaccaattctttggtaaaatgcttgctcaataatgctaaggga
actggaccattgaattttgctgggacttcatctagtgtaaatgctgcagctagcaattca
ttgccttcaatgttccctgctggcagtacaccaccactttcaccaagaagttcatcagga
tctcctcggatcttgaaacagagggcaggcccatctgctttaggttctcccttaaaatta
gtgaatgagcccgtgaaggagcttatacctcagttctatttccaagatggccgtccagca
ccgaatgaactgaaagagcggtgcttgtttagaatcaatcaatttttttatggtcacatg
gatggactccaaatgcacgaatttaaaccggtaacaaaagaaatttgcaagcttccatca
ttcttttccacagcactgtttagaaagattgatgttgacggcactggagttgtgaccagg
gatgcgtttgttgactattggatcaatggaaatatgttgacaaaagatatagcaacacaa
ttatacacaatcttgaagcaaccggatctcaaatacttggtccagaatgacttcaaacct
gtgcttcgggaacttttggtaactcatccaggattagagttcctgcagagcacacctgaa
tttcaagaaagatatgctgaaactgtaatatacagaatattttactacgtgaatagatcg
ggtaatggtcgtcttacactcagggagctgaaacgttcgaatttaattgctgcaatgcaa
catgcagatgaggaagaggatattaacaaagtcttgaggtacttctcttatgaacatttt
tacgtgatatattgtaagttttgggagctggatacagatcatgattttttgattgacaag
gagaacctcatcagatatggtaaccacgcccttacctacaggattgttgatagaatattt
tctcaggttcccagaaagttcaccagtaaggttgaaggaaagatgggctatgaagatttt
gtttacttcatattgtcagaggaggataaatcatctgagcctagtcttgagtattggttc
aagtgcatagatttagatggaaatggagttattacaaggaatgaaatgcaattcttttat
gaggagcagttgcacagaatggaatgcatggcacaagagcctgtgctttttgaggacatt
ttgtgtcagatagttgatatgattcacccagaggatgagagctattttacattacatgat
ttaaaaggaagcaaactttcaggcagtgtttttaatatcctttttaacctaaacaaattc
atggcttttgagactcgtgatcccttcctaattcgccaggagcgtgagaacccacatttg
actgagtgggatcgctttgcacatagagaatacattaggctttctatggaggaagataca
gaagatgcttctaatggcagtgcggatgtttgggatgaatcacttgaggctcctttctga
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