Sesamum indicum (sesame): 105172151
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Entry
105172151 CDS
T04135
Name
(RefSeq) DNA topoisomerase 2-binding protein 1-A isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105172151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sind03032
]
105172151
03400 DNA repair and recombination proteins [BR:
sind03400
]
105172151
DNA replication proteins [BR:
sind03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
105172151
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
105172151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTCB-BRCT
BRCT
BRCT_2
BRCT_3
RTT107_BRCT_5
TopBP1_BRCT0
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
105172151
NCBI-ProteinID:
XP_011091796
UniProt:
A0A6I9UCB0
LinkDB
All DBs
Position
LG10:complement(6530505..6543871)
Genome browser
AA seq
940 aa
AA seq
DB search
MATKVFKGANVFMSRNLVPPELFDALHDALKLNGAQVLLCCDPSRNGPNDYHVIASHDHE
KFEDLRAKGCKLIGPQCVLSCAKEHRVLPNQGFTCCLAMDGVNILASGFEKDEKAEIAKM
VTAMGGVLVTKASSDVSFVIVKNVLAQKYKWALNNLKKPIVTTNWLLQCWKEHRVVPQDC
YRVLPFSGLTICVSGIPADERKEMEKLVMQNGGKYSAELTKRCTHLVCDAPEGDKYKVAK
RWGHIYIVTRKWFHQSVARRACLSEESYPVQGSTISSLSTLKTVEQHSQGKVIRNSQHTS
SSMATASDSETNFSAQDMGPDFENPLPNIYPAFFEAPSLPKEDNDPPADMQKNDPNFARC
IADDSQSEDDDLYLSECRILLVGFEASELRKLVDMVRRGGGSRYMSFSEKLTHVIVGKPS
ELEIKEVRSVAAFGVIYVVKTAWLEECTFKKKEVPVLKSHIAYDLLLPKDPVIFNKATAT
NMNSAKQMKSSASQPMDDNILENKSSQCEVVIGLKEEAKPKVQSGVSNGKHMKSSAVFKG
KLFGFSSTFPEEQRPEIVLWVHEGGGEVIVDQQVNNVHFTVERHGVPHLTHTFRSTYVTT
HWIHSCLQDGCLLDVSSHILYSPLTCQIPLPGFEGFRLCVSRYDMRERQLLRNLCYVLGV
KFVEKLTKKVTHLLCKFADGDKFEAACRWGIHVVTAEWIYECAMKNKVVDLKGFYPKELT
SQDREAGLYFVSQYPTQSVRMTSGDDASQCLSQLQDQSNMQRVASTGCMARYKDNDSSNG
SKRARLLGNDSIKHPLSFVSAADNSVNRKNPTENNVTECTREPSVVPDVAAAIEDLLEQT
SKIQDRKSQETSGCHENFLSSNSTMLGQRHADGQSDPGPSKHWMNRLEKRDDNPSADAAA
RGFYDGFSETQTDSQVVGYEEDLSGRQMIIDRVRTRSSMA
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaaagtgtttaaaggagcaaatgtgttcatgtcgcggaatctggttccgccg
gagctcttcgacgcgcttcacgacgccttgaagctaaacggtgcgcaggttttgctctgc
tgcgatccctcgcgcaatgggcccaatgattatcacgtcatcgcctcccatgatcacgaa
aagtttgaggatctacgagcaaagggctgtaagttaatcggtcctcagtgtgttttgtcc
tgtgcaaaagaacatagggtgctgccgaatcagggcttcacctgttgccttgcaatggat
ggtgtcaacatacttgcatctggttttgagaaggatgaaaaggctgagattgcaaagatg
gttaccgcaatgggaggagtattggttacaaaagcatcatcagatgtcagttttgttatt
gtgaagaatgttttggctcaaaaatacaagtgggcgctgaacaatctgaaaaagccaatt
gtgacaacaaattggcttcttcagtgttggaaagagcaccgtgttgtacctcaagattgc
tacagggttcttcctttttctggattgacgatatgtgttagtggaattcctgcagatgaa
cgtaaggagatggagaagctcgttatgcaaaatggaggcaaatattctgctgagctgacc
aagagatgtacacatttagtctgtgatgctccagaaggtgacaaatataaggttgcaaaa
agatggggacacatatacatagttaccaggaagtggtttcaccaatctgttgccagaaga
gcgtgccttagtgaggagtcctaccctgttcaaggtagtacaatatcttctttgagtact
ttgaagacagtggagcaacatagtcaagggaaagttatcagaaattcacaacatacctca
tcatctatggccaccgcctcagattcagaaaccaatttttctgctcaggatatgggacct
gattttgaaaatcccctgccaaatatatatcctgcattttttgaggctccttccttacct
aaagaggacaatgatccacctgctgatatgcaaaaaaatgatcctaattttgctcgttgc
attgctgatgactctcaaagtgaggacgatgatctatacttgtccgagtgcagaattctg
cttgtaggctttgaggcttctgaattacgcaagctagttgacatggttcgccgtggagga
ggttctcgttatatgtcattcagtgagaaattgacgcatgttatagttggaaaaccatca
gagcttgagatcaaggaagtaaggagcgttgcagcttttggagtcatttatgtagttaaa
acagcatggcttgaagagtgcaccttcaagaagaaagaagttcctgtacttaagagccat
atcgcttatgatttacttcttccaaaagatcctgtaatcttcaataaagcaactgcgacg
aacatgaatagtgcaaaacagatgaagtcctctgcttctcagcccatggacgataacatc
ttggagaacaagagctctcaatgtgaagtggtgataggtttaaaagaagaggctaaacca
aaggtgcaaagtggtgtgagcaatggaaaacacatgaagtcatcagctgtatttaaaggg
aagctcttcggtttctcaagcacttttcctgaagagcaaagaccggaaattgtgctgtgg
gtacatgaaggtggtggagaggtcattgtagatcaacaagtaaacaatgtgcacttcaca
gttgagcgtcatggtgtgccccatctgacgcatactttcaggagtacatatgtcactact
cattggattcattcttgtctacaggatggttgtttgctggatgtcagcagtcacattctc
tactctccgcttacatgccaaattcctttacctggatttgaaggatttcgcctctgtgtt
tcacggtatgatatgcgagaaagacagctgctaagaaatttgtgctatgtccttggggtg
aagttcgttgaaaaactgacaaagaaagtcactcatctattgtgtaaatttgctgatggt
gataaatttgaggctgcttgtagatggggaatacatgtagttacagctgagtggatatac
gaatgtgctatgaagaacaaagttgttgatttgaaaggtttttatcctaaagaacttacc
tctcaagaccgcgaagcaggtttatattttgtgagccaatatcctacccaatctgttaga
atgacatctggagatgatgcctcccaatgtctgagtcagttacaggatcaaagtaatatg
cagagagttgcttcgacggggtgtatggcgagatacaaagacaatgattcaagtaatggt
agtaagagggcaaggcttttgggaaatgatagtataaagcatccactatcctttgtatct
gctgctgataattctgtcaataggaagaatcctactgaaaacaacgtaactgaatgtact
agggaaccttctgtagttcctgatgtggctgcagctatagaggatttattggagcaaaca
agcaagatccaagatcggaagtcacaggagacaagtggttgccatgaaaactttctatct
tctaattctacaatgcttggtcaaaggcatgctgatggccagtctgatccggggccatct
aagcactggatgaacaggttagagaaaagggatgataatccctctgctgatgctgcagct
agaggattttatgatggatttagtgaaacacaaactgattcccaggtcgttggttatgaa
gaagatttatctggtcggcaaatgatcattgatagagtgcgtacaaggagtagcatggct
tga
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