Sesamum indicum (sesame): 105172297
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Entry
105172297 CDS
T04135
Name
(RefSeq) vacuolar protein sorting-associated protein 36 isoform X1
KO
K12190
ESCRT-II complex subunit VPS36
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105172297
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sind04131
]
105172297
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sind04147
]
105172297
Membrane trafficking [BR:
sind04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
105172297
Exosome [BR:
sind04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
105172297
Exosomal proteins of colorectal cancer cells
105172297
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
MKT1_C
Motif
Other DBs
NCBI-GeneID:
105172297
NCBI-ProteinID:
XP_011091983
UniProt:
A0A6I9U553
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Position
LG10:complement(10418037..10429354)
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AA seq
441 aa
AA seq
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MAEEFLPAAELTASGRPVLKSGEVECSLLSAVDLLSEDNPTFPHFKSGLLILTTHRLLWL
PPETTTRTETSAFVPLSAVQHIFSPMKSIKSMFHSPRIRFQVSATPEGRVAVSGGPKSVV
ITLIVRGKTDPDSFLGKFWDAWRGRAWEASGSESGSRSEDGAGSTSGSLALRAPVVGVAG
ILRKEQEMWESTDKSLQDAFQDLNALMSKAKEMVMLAEKMRLKLLSGSNNQTSGANDDEM
GTKEEMQDWLLSVGIVSPVTKESAGALYHQQLSRQLADFVKIPLERAGGMINLIDIYCLF
NRARGTELISPDDLLQACSLWEKFDVSVMLRKFDSGVMVIQSKTHSDEEVFARIKSLMMK
PEALQNGISASDAAMTLGVAPAMAKEYLLAAEGKGLLCRDVSPDGFRFYINLFLELNSDD
IYFVKDHSRYSTWIGAVSTSS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaattccttccggcggcggagctcacggcaagcggccgccccgtgttaaaa
tctggagaggtggagtgctccctcctatccgccgttgaccttctatcagaggacaatccc
accttcccccacttcaaatccggccttctcatcctcacaactcaccgcctcctctggctc
ccaccggaaaccaccactcgaacagaaacttctgcttttgtccctctgtcagcagtccaa
cacattttctcccccatgaaatccatcaaatccatgtttcacagtcccaggataaggttc
caggtttctgcaacccccgaggggagggtcgctgtgagtggcggaccaaagtctgtggtg
atcacgttgatagttagagggaaaactgacccagattcgtttttgggtaaattttgggac
gcatggagaggaagggcctgggaggcaagcgggtcggagtcaggctcgcgttcggaggat
ggtgctggatcaacttccgggtcgttagcattgcgagcaccggtggtgggggtggcgggt
atattgaggaaggagcaggaaatgtgggagagtactgacaagagcttgcaggatgctttt
caggatttgaatgctctcatgagcaaggcaaaggagatggtgatgctagctgagaagatg
agattaaagctgctttcaggctcaaataatcaaactagtggggcgaatgatgatgagatg
ggtactaaggaagaaatgcaagattggttgttgagtgttggtattgtatcccctgttaca
aaggagtctgccggtgctttgtatcatcaacagctatctcgtcagttggcagattttgtg
aagatacctttagagagagctggaggaatgattaacctgatagatatttattgccttttc
aatcgagcccgaggcacagaattgatctcacctgatgatttactccaagcatgttctctc
tgggaaaagtttgatgtctctgttatgcttcggaaatttgatagtggtgtcatggtgatc
cagagtaaaacccatagcgatgaagaggtatttgctagaattaagtctttgatgatgaaa
ccggaggccttacaaaatggaatcagtgccagtgatgcagcaatgactctgggggttgct
ccagctatggctaaggaatatctccttgcagctgaaggaaaaggattgctttgtagagat
gtcagtcctgatggctttcgcttttacatcaatttgtttctagaactcaattcagacgat
atatactttgtgaaggatcacagtagatatagcacatggataggggctgtctcaaccagt
tcatga
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