Sesamum indicum (sesame): 105172393
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Entry
105172393 CDS
T04135
Name
(RefSeq) serine/threonine-protein phosphatase PP1 isozyme 9
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105172393
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sind01009
]
105172393
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105172393
03019 Messenger RNA biogenesis [BR:
sind03019
]
105172393
03041 Spliceosome [BR:
sind03041
]
105172393
Enzymes [BR:
sind01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
105172393
Protein phosphatases and associated proteins [BR:
sind01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
105172393
Transcription machinery [BR:
sind03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
105172393
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
105172393
Spliceosome [BR:
sind03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
105172393
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
105172393
NCBI-ProteinID:
XP_011092094
UniProt:
A0A6I9U3G2
LinkDB
All DBs
Position
LG10:12513931..12517487
Genome browser
AA seq
317 aa
AA seq
DB search
MMTMEGMMDEGVLDDIIRRLLEGKGGKQVQLSEAEIRQLCVNSRQIFLSQPNLLQLRAPI
RICGDIHGQYQDLLRLFEYGGYPPSANYLFLGDYVDRGKQSLETICLLLAYKIRYPDKVF
LLRGNHEDAKINRVYGFYDECKRRFNVRLWKIFTDCFNCLPVSALIDEKILCMHGGLSPE
LEKVDQINELPRPTEIPDNGLLCDLLWSDPDPRISGWADSDRGVSCTFGADAVAEFLKKN
DLDLICRGHQVVEDGYEFFAKRRVVTIFSAPNYGGEFDNAGALLSVDEALVCSFEILKSA
ASSSKTPLKKPPKAGAH
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgatgacaatggaagggatgatggatgagggggtgttggatgatataataaggcggctg
ttggaagggaaaggtgggaaacaggtgcagctctcggaggcggagatccgccagctctgc
gtcaactcccgccaaatcttcctctctcagcccaatctcctccagctccgtgcccctatc
aggatctgcggtgacattcatggacagtaccaagaccttttgaggctcttcgagtatggt
ggataccccccttcagcaaattacctttttctaggtgattatgttgatagaggcaagcag
agtctggaaacaatatgcttgctattggcttacaaaataaggtatcctgataaagttttc
ctcttaaggggaaaccatgaagatgccaaaatcaaccgtgtctatggattttatgacgaa
tgcaagaggagatttaatgttcggctttggaagatatttactgactgctttaattgtctg
cccgtttctgcactcatagatgaaaagatactctgcatgcatggaggactttctccagag
ctggaaaaggtggatcaaattaatgaacttcctaggcctactgagattcccgataatggt
ctcctgtgcgatttgctctggtctgatcccgatcctaggataagtggttgggctgatagt
gataggggcgtttcgtgtacttttggagccgatgcagttgctgagtttttgaagaaaaat
gacttggacctcatttgcagaggtcatcaggttgtggaggatgggtatgaattctttgct
aaaagaagagttgtcacgatattttcggctccaaactatggtggagaattcgacaatgct
ggtgctcttttgagcgttgacgaagcactagtatgttcttttgagatactaaaatctgca
gcaagcagttcgaagacaccactgaaaaagcctcctaaagctggagcccactga
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