KEGG   Sesamum indicum (sesame): 105172407
Entry
105172407         CDS       T04135                                 
Name
(RefSeq) pre-mRNA-splicing factor 38-like
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
sind  Sesamum indicum (sesame)
Pathway
sind03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sind00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    105172407
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sind03041]
    105172407
Spliceosome [BR:sind03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    105172407
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    105172407
SSDB
Motif
Pfam: PRP38 PRP38_assoc HIND
Other DBs
NCBI-GeneID: 105172407
NCBI-ProteinID: XP_020553171
UniProt: A0A8M8VAK9
LinkDB
Position
LG10:12831480..12836656
AA seq 388 aa
MANRTDPLAKSIRGTNPQNLVEKILRTKIYQNTYWKEQCFGLTAETLVDKAMEIDHLGGT
HGGNRKPTPFMCLIMKMLQIQPDKEIVVEFIKNPEYKYVRALGAFYLRLTGTDVDVYRYL
EPLYNDYRKLRLKLNDGKFTLTHVDEFINELLTTDYSCDIALPRIRKRLTLEAIDSLEPR
RSALEDDFEEEEEKDEDEQLADGLDSGGHEVHDKDYYGARSPTRERGRDRRRDNHRYRDR
DYDRERDYDKVYDRDRGRGRDRDGERDRDRHRPRDEKDYGRERDREREREREGRERERRD
RERGRRRSHSRSRSRSRDRKDRDGDDRRKRPRSSASPKRRGGRPEDARAEPRKKKEKANK
DDGTDHPDPEIAEQNRLRASLGLKPLKL
NT seq 1167 nt   +upstreamnt  +downstreamnt
atggcgaatcggacggaccctctggcgaagagcataaggggtacgaaccctcagaacttg
gtggagaagattctgcgcaccaagatataccaaaacacctactggaaggagcagtgcttc
ggcctcaccgccgagacgctcgtcgacaaggccatggagatcgaccaccttggcggcacg
cacggcggcaaccgcaagcccactccttttatgtgcctcatcatgaagatgcttcagatt
cagccagacaaggaaatcgttgtcgaattcataaaaaatcctgagtacaaatatgttcgt
gcacttggagccttctatttgcgactcacagggacagatgttgatgtttatcgttacctg
gaacctttgtacaatgattaccggaagttgaggctcaagctaaatgatggaaagttcaca
ttgactcatgttgacgagtttatcaatgagcttctgacaacagattactcttgtgatatt
gctctgcctcgaatcagaaaaaggttgacccttgaagccattgattcactagaacctcgg
agaagtgctcttgaagatgattttgaagaggaagaagagaaggacgaagatgagcaactt
gcagatggattagattctggcggccatgaggtccatgacaaggattactatggggcacga
agtccaactagggaaagaggtcgtgataggagacgagataatcatagatacagggatcga
gattatgaccgagagcgtgattatgacaaagtttatgatagagatcgtggaagaggacgt
gatagagatggagaaagagacagagataggcatcgcccaagagatgaaaaggattatggt
cgtgaaagagacagggagagggagagggaaagggaaggcagggaacgagaaaggcgagat
agggagcgtgggaggaggagaagccattcaaggagccgaagtagaagtagagatcgcaag
gaccgtgatggtgatgaccgtcgcaaaaggcctcgtagcagtgctagtcctaaaaggcgt
ggggggaggcctgaggatgctcgggctgagccaagaaagaagaaagagaaggcaaataaa
gatgatggaacagatcatccggatcctgagattgcagaacaaaataggctcagggcatca
cttggactgaagcctctcaaattgtga

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