Sesamum indicum (sesame): 105172420
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Entry
105172420 CDS
T04135
Name
(RefSeq) zinc finger matrin-type protein 2
KO
K12848
U4/U6.U5 tri-snRNP component SNU23
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105172420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sind03041
]
105172420
Spliceosome [BR:
sind03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
105172420
Complex C
U4/U6.U5 tri-SnRNP related factors
105172420
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-met
zf-C2H2_jaz
zf-U1
zf-C2H2
Vma22_CCDC115
Motif
Other DBs
NCBI-GeneID:
105172420
NCBI-ProteinID:
XP_011092135
UniProt:
A0A6I9U3K4
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All DBs
Position
LG10:13023066..13028730
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AA seq
203 aa
AA seq
DB search
MAQSSNAAAGVDNTFRRKFDREEYLQRAREREEKEAEGRSKSKSRGPPVQRKPLKHRDYE
VDLESRLGKTQVVTPIAPLSQQAGYYCSVCECVVKDSANYLDHINGKKHQRALGMSMRAE
RATLEQVQRRFEVLKKRKDTGGFTEQDFDERILKQQQEEEERKRQRREKKKEKKKEKATE
EEPEVDPDVAAMMGFGGFRSSKK
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggctcaatccagcaacgccgctgctggagttgacaacacttttcgaagaaaatttgat
cgagaggagtatctgcagcgcgctcgcgagcgtgaagaaaaggaggcggagggtcgttca
aaatctaaatcaaggggtcccccagtgcaaaggaagccattgaaacacagggattacgaa
gtggacctcgaatcgcgattgggaaaaactcaggttgtgacaccaattgcacctctaagt
cagcaggcaggatactactgctcagtttgtgaatgtgtagtaaaagattctgcaaactac
ttggatcacataaatggaaagaagcatcaacgagccttgggtatgtcgatgcgggctgaa
agggcaaccttggagcaggttcagcggcggtttgaagttcttaagaaaaggaaagatact
ggaggctttactgagcaagattttgatgagcggatcttgaaacaacaacaagaagaagag
gaaaggaagcgtcaacgacgggagaaaaagaaagagaagaagaaagaaaaggctactgag
gaggaacccgaggtagatcctgatgttgcagcgatgatgggattcggaggtttccggtca
tcgaaaaaatga
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