Sesamum indicum (sesame): 105172595
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Entry
105172595 CDS
T04135
Name
(RefSeq) protein RAE1
KO
K14298
mRNA export factor
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105172595
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105172595
03036 Chromosome and associated proteins [BR:
sind03036
]
105172595
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105172595
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105172595
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_C
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_Nup120_160
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
105172595
NCBI-ProteinID:
XP_011092410
UniProt:
A0A6I9UE14
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Position
LG10:complement(14782920..14787160)
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AA seq
348 aa
AA seq
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MSAFGATSTNLNPNRSTEVVQPPTDSVSSLSFSPKANFLVAASWDNQVRCWEVTRSGTTI
GTVPKASISHDQPVLCSTWKDDGTTVFSGGCDKQVKMWPLLSGGQPVTVAMHDAPVKELA
WIPEMNLLVTGSLDKTLRYWDLRQQNPTWVQQLPERCYALTVRHPLMVVGTADRNLIVFN
LQNPQAEFKRIVSPLKYQTRCLAAFPDQQGFLVGSIEGRVGVHHLDDSQSSKNFTFKCHR
DGNDIYSVNSLNFHPIHHTFATAGSDGAFNFWDKDSKQRLKAMQRCNQPIPCSTFNNDGS
IFAYAVCYDWGKGAENHNPSTAKTYIYLHLPQDAEVKAKPRAATGSRK
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcattcggcgctacttcgactaacttaaatcctaaccgttccactgaggtggtg
caacctccgacggattcagtatcaagcctgagtttcagtcctaaggccaattttttggtg
gctgcttcgtgggataatcaggtacgatgttgggaggtaactagatcaggaaccaccatt
ggcactgttccaaaggcatcaatatcacatgatcagccagtcttgtgctcaacatggaag
gacgatgggacaactgtcttttctgggggctgtgacaagcaagttaaaatgtggccgcta
ttatctggtggccaacccgttacagtggccatgcacgacgcccctgttaaagagctcgct
tggatcccagagatgaatctcctagtcactggaagcttggacaagacactaaggtattgg
gatctgagacagcaaaatccaacttgggtgcaacaacttcctgagcgctgctacgcgctt
actgttagacatccacttatggttgttggaactgctgatagaaatcttatagtcttcaac
ttgcaaaaccctcaggctgagttcaagcggattgtttcacccctaaagtaccagactagg
tgtctagctgctttccctgatcagcaaggtttcttggttggatctattgaaggaagagtt
ggtgtacaccaccttgatgattcacaatcaagtaaaaactttactttcaaatgccacagg
gatggcaatgacatttactctgttaactcactgaattttcaccctatacaccacacgttt
gccactgccgggtctgatggggccttcaatttttgggacaaagatagcaaacagaggctt
aaggctatgcagagatgcaatcagccaataccttgcagcactttcaacaacgatggttcc
atctttgcatatgcggtgtgttatgattggggcaagggtgctgaaaatcataatccatca
acagcaaagacttatatatacctgcatctgcctcaggatgctgaggtgaaagccaaacca
cgtgctgcaacgggcagtagaaagtga
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integrated database retrieval system