Sesamum indicum (sesame): 105172700
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Entry
105172700 CDS
T04135
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03020
RNA polymerase
sind03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
105172700
09124 Replication and repair
03420 Nucleotide excision repair
105172700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105172700
03400 DNA repair and recombination proteins [BR:
sind03400
]
105172700
Transcription machinery [BR:
sind03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
105172700
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
105172700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
105172700
NCBI-ProteinID:
XP_011092547
UniProt:
A0A6I9U172
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Position
LG10:15532489..15536023
Genome browser
AA seq
319 aa
AA seq
DB search
MEGVSYQRFPKIKIRTVRDDFMKFELRDTDASIANALRRVMIAEVPTIAIDLVEIEVNSS
VLNDEFIAHRLGLIPLTSERAMSMRFSRDCDACDGDGQCEYCSVEFHLRAKCINDQTLDV
TSKDLYSSDHTVVPVDFSDSSTGFDNTENRGIIIVKLRRGQELVLRAIARKGIGKDHAKW
SPAATVTFMYEPEIYINEEMMEGLTLEEKKEFVDSSPTKVFDINPNTHQVYVHDAEAYTY
DDEVLKKAEAMGKPGLVEIHAKEDSFIFTVETTGGIKASQLFLNAIDVLKQKLDAVRLSS
DTVEADEQFGELGAHMRGG
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgtttcataccagagattcccgaagatcaaaatccggacggtgagagacgat
ttcatgaagttcgagctaagggacacagacgccagtatcgccaacgcgctccgccgcgtt
atgatcgctgaagttcccaccattgctattgatttggtggaaatcgaggtgaactcgtcg
gtcctcaacgatgagttcatcgctcatcgtctcgggctcattccacttaccagcgagcgt
gctatgtccatgcgcttctcccgagattgcgacgcctgcgacggagacggccagtgcgag
tattgctccgtcgagttccatttacgagccaagtgcattaatgaccagactcttgatgtt
acctctaaggacctttacagctctgaccacaccgttgttccagttgatttctccgattcg
tctactggatttgataacacggagaataggggaatcatcattgtgaagctgcgtcgtggt
caggagctggttttaagagccatagctcggaaaggaattggcaaagatcatgctaaatgg
tcacctgctgctactgttactttcatgtatgaacctgaaatctatataaatgaagagatg
atggaaggcttaacccttgaggagaagaaagagtttgttgatagcagccccacaaaagtg
tttgacattaatcccaatacccaccaggtttatgttcatgatgctgaagcatatacgtat
gatgatgaggtgcttaagaaagctgaagcaatggggaaacctggccttgtggagatccat
gccaaggaagatagtttcattttcacagttgagacaacgggcggaataaaagcttctcaa
ttgtttttgaatgccatagatgtcctgaagcagaagttggatgctgttcgcttgtcatca
gacacggtggaagctgatgaacagttcggagagttgggagcacatatgcgtggaggttga
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