Sesamum indicum (sesame): 105172753
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Entry
105172753 CDS
T04135
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A
KO
K07466
replication factor A1
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03030
DNA replication
sind03420
Nucleotide excision repair
sind03430
Mismatch repair
sind03440
Homologous recombination
sind03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105172753
03420 Nucleotide excision repair
105172753
03430 Mismatch repair
105172753
03440 Homologous recombination
105172753
03460 Fanconi anemia pathway
105172753
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sind03000
]
105172753
03032 DNA replication proteins [BR:
sind03032
]
105172753
03400 DNA repair and recombination proteins [BR:
sind03400
]
105172753
Transcription factors [BR:
sind03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105172753
DNA replication proteins [BR:
sind03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
105172753
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
105172753
MMR (mismatch excision repair)
105172753
DSBR (double strand breaks repair)
HR (homologous recombination)
105172753
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-CCHC
DUF936
DUF223
zf-CCHC_3
NGO_1070-like
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
105172753
NCBI-ProteinID:
XP_011092631
UniProt:
A0A6I9UEL6
LinkDB
All DBs
Position
LG10:complement(15879045..15882687)
Genome browser
AA seq
868 aa
AA seq
DB search
MPPINLTEGAIAMLSSGDAQGTDIKPVLQVADIRLVNTQNQNNNERYRILLSDGAFTQQG
MLATQRNDLVRSEKLQKGSIVQLTQFVCNLIQNRMIIIIIDLDVIVEKCDPIGEPKQYPT
KTDGNVSSVARPSTPSQPMNQPAASSGNPPPYGASSVMSSAPRPNVGGGGVHVPHLGEDR
SAGSHSYSSSFSSNMDAGRYKSSNAPPVYPKTETSPVVSRAPVNNYVRPPQSLYHQPPPM
FANRGPIAKNEAPPRIIPIAALNPYQGRWTIKARVTAKGELRHYNNPRGDGKVFSFDLLD
SDGGEIRVTCFNAVADQFYHQIEPGRVYMISRGTLKPAQKAFNHLRNDHEIMLDSTSTVQ
PCFEDDKSIPQQQFHFRPISDIEGMENNSVVDVIGVVSSISPSSSIMRKNGTETQKRTLQ
LKDMSGRSVELSLWGNFCNAEGQTLQNMCDSGIFPVLAVKSGRVNDFNGKSVGTISTSQL
FIEPDFPEAQKLKTWFENDGKSIPAISISRETSIVRTDVRKTISQIKDEKLGTSEKPDWI
MVSATLTFIKVDNFCYTACPIMIGDRQCNKKVTNNGDGKWRCDRCDQLVDECDYRYILQM
QIQDHTGLTWVTAFQESGEDIMGMSAKDLYYLKYEEQDDEKFAELVRSVLFTKFLFKLKV
KEETFSDEQRVKSTVVKAEKVNFQTETRYLLDLIAKFKEEDSGSLPPKSENIISTSGLST
GGFGIGSRESVPPAVNYSGTTSNVTRETGVPTSQMNSYSNQYGGSRFPSAGSSGMYTSCS
SCGGTGHNSSNCPSLMSGPGQSYGSGLGNKGIPGAGGGGASGECFKCHQLGHWARDCPGT
SNVPPAYGSSNVTPGRYGMAPKQHVGGF
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atgcctccgattaatttgacggaaggggcgatagcgatgctttcgagcggcgacgctcaa
gggaccgacatcaagccggtgctgcaagtcgcagatatacggctggtcaacactcagaat
cagaataacaacgagcggtaccggatccttctctcggacggggcgttcactcagcagggt
atgctcgccacccagcgcaacgatttggtacgatccgagaagctgcagaaaggctccatt
gtccagttgacgcaattcgtctgtaaccttatccagaaccgcatgattatcatcatcatt
gatctggatgtgatagttgaaaaatgtgatcctattggtgaaccaaaacaatatccaaca
aagacagatgggaatgtttcttcggtagccaggccgtccacgcccagtcagccaatgaat
cagccagctgccagtagtggtaatcctccaccttatggtgccagttcagtcatgagttca
gctcctaggccaaatgtggggggcggtggtgttcatgttcctcatttgggggaagatcgt
agtgcaggctcacattcgtatagtagttctttttcaagcaatatggatgccgggagatat
aaatcttcaaatgctccaccagtatatccaaaaacagaaactagtcctgttgtttcgcgg
gcccctgtgaataattatgtccgcccgcctcagtcactatatcatcagcctcctccaatg
tttgccaacagagggccaatagctaaaaatgaagctcctccaagaatcattcctattgct
gcattgaatccgtatcagggaaggtggacaattaaggctagagtaacagctaagggagaa
ctcaggcactacaataatcctcgaggtgatggtaaagtattctcctttgaccttcttgat
tctgatggtggagaaataagggtgacatgcttcaatgctgtggctgatcaattttaccat
caaattgagccaggtagagtttatatgatctcaagagggacactgaaacctgctcaaaaa
gctttcaatcacctacgcaatgatcatgaaattatgctggacagcacttccactgtgcag
ccttgctttgaggatgataaatcaatcccacagcagcaatttcattttcgccctataagt
gacattgaaggcatggagaacaacagtgttgtggatgtgattggtgttgtttcttcaatc
agtccatccagctcaataatgagaaaaaatggtactgaaactcagaaaagaaccctccaa
ctgaaggacatgtctgggagaagtgttgagttgtcgttgtggggaaacttctgcaatgct
gaaggccaaacactacagaacatgtgtgattctgggatctttcctgttttggcggtgaaa
tctggcagagttaatgattttaatggaaaatctgtagggaccatatccactagtcagttg
ttcatagagcctgattttcctgaggcccagaaacttaaaacgtggttcgaaaatgatgga
aagagcatccctgcaatatcaatatccagggaaacaagtatagtgcggacagatgtgcgc
aaaactatatctcagattaaagatgaaaaattagggacgtccgagaagcctgattggatc
atggtctctgccactctgacattcataaaagtggataatttttgctacactgcatgtccc
atcatgattggcgatcgtcaatgtaacaaaaaggttacgaataatggggatgggaaatgg
cgatgcgatagatgtgatcaattagttgatgaatgtgattataggtatatcctccagatg
caaatccaggatcacaccggcttaacatgggtgactgcctttcaggaaagtggggaggac
ataatgggtatgtctgcaaaagatttgtattacttaaagtatgaagaacaagatgatgag
aaatttgctgaacttgtgcgaagtgttcttttcactaaatttttattcaagttgaaagtg
aaggaagagacatttagtgacgaacagcgggtaaagtcaacagttgtcaaagcagagaaa
gtgaatttccaaacagagactaggtatctgctggacttgatagctaaattcaaagaagag
gactcgggttctctaccaccaaaaagtgaaaatataatttcaacatctgggcttagtaca
ggtggatttggtattggaagtagggaatccgtaccacctgctgtgaattacagtgggact
actagcaatgttaccagggagactggtgtacctacaagtcagatgaattcatatagtaat
cagtacggtggctcaagatttccttcagctggctcctctggcatgtatacgagctgtagt
agctgtggtggaacaggacataactcttccaattgcccaagtcttatgagtggtccagga
caatcttatggaagtggtctcggcaacaagggaattcctggggcaggtggtgggggtgca
tctggtgagtgctttaagtgccatcaattaggccactgggcaagggattgcccgggcacg
agcaatgtgcctcctgcttatgggagcagtaatgtgacccctgggagatatggcatggca
ccgaagcagcacgttggtgggttttga
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