Sesamum indicum (sesame): 105172775
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Entry
105172775 CDS
T04135
Name
(RefSeq) ATP-dependent helicase BRM isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105172775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105172775
03036 Chromosome and associated proteins [BR:
sind03036
]
105172775
Transcription machinery [BR:
sind03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
105172775
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
105172775
Chromatin remodeling factors
BAF complex
105172775
PBAF complex
105172775
GBAF(ncBAF) complex
105172775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
QLQ
DEAD
AAA_14
Motif
Other DBs
NCBI-GeneID:
105172775
NCBI-ProteinID:
XP_011092655
UniProt:
A0A6I9U1G1
LinkDB
All DBs
Position
LG1:17819760..17832403
Genome browser
AA seq
2222 aa
AA seq
DB search
MQSGTGRQQGGGGGHGRSTAGSASASPSSSSSAVSAFDQQQQQQQQQQRLSLQQQFLRRP
EGNDALLAYQAGNVHGLLGGANFPAASGSMQLPQQPRKFIDLGQQHGTSKVPEQSHSRSQ
GVEQQMLNPIQQAYLQYAFQAAQQKSVQSQQQMKPGMFGSLGKDQEMRMGNMQMQDLVSI
QSANSQASSSKKSSEQVAQSDKQADHSQRPAPDHRTDPKLNHPTLLGQVIPSAPMLGPQS
QQNMMNMTSNLAAQMQAMQALALERNIDLSHPANANVMAQLIPLMQTRMVAQQKANENTA
AMQSVSFAKQHVTSPQIGNESSPHGNSSSDVSGQSGSSKARQAVSHSNLGVTSSATLVNN
SGNKPVQQLSMHGRDNHLPPRLPTLLGHGIPPVHPSQSSGNVSQGVESVVAKTSATVPDA
PQVQNGRQCNRSPQSVTPSNDGDAGIASTSQGGSVSQMRQSHVGFTKQQLHVLKAQILAF
RRLKKGDGTLPRELLQAIAPPPLDLQAQQVSPPPVSVCKDRSGGENVNEHARNVESTEKG
PQVVKSPAGVSNLKEEGSGDNRAAALTVNVQSSTTTAREPRFLAPPGKEEQQSLGSSGKS
EQDPEPGNQKTPVRGDVAADRGKAIATQSNVSDSIQVKKPIQASNTTQPKDGGSTRKYHG
PLFDFPVFTRKHETLGSSMMNNNNNLTLAYDIKDLFADEGGEIRKRKRAEKIEKIDKILA
VNLERKRIRPDLVIRLQIESKKLQLAECQARLRDEIEQQQQEIMAMPDRPYRKFVRLCER
QRQELNRQSQANQKAIREKQLKSIFQWRKKLLEAHWGIRDARTARNRGVHKYHERMLREF
SKRKDDDRNKRMEALKNNDVERYREMLLEQQTNIPGEAAERYAVLSSFLTQTEEYLHKLG
SKITAAKNQQEVEEAANAAAAAARAQGLSEEEVRAAAACAREEVMIRNRFSEMNAPRDSS
SVNKYYNLAHAVNEKVIRQPSMLRAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKT
VQVMALIAYLMEFKGNYGPHLIIVPNAVLVNWKSELHNWLPTVSCIYYVGGKDQRSKLFS
QEVLALKFNVLVTTYEFVMYDRSKLSKIDWKYIIIDEAQRMKDRESVLARDLDRYRCQRR
LLLTGTPLQNDLKELWSLLNLLLPEVFDNRKAFHDWFSQPFQKEGPTHNAEDDWLETEKK
VIIIHRLHQILEPFMLRRRVEDVEGSLPPKVSIVMKCRMSAIQSAIYDWIKSTGTLRVDP
EDERRKVQKNPIYQAKTYKTLNNRCMELRKACNHPLLNYPYFSDFSKDFLVRSCGKLWVL
DRILIKLQRTGHRVLLFSTMTKLLDIMEEYLQWRRLVFRRIDGMTSLEDRESAIVEFNRP
DTDCFIFLLSIRAAGRGLNLQSADTVIIYDPDPNPKNEEQAVARAHRIGQTREVKVIYME
AVVDKISSHQKEDEFRNGGTVDSDDDLAGKDRYMGSIESLIRNNIQQYKIDMADEVINAG
RFDQRTTHEERRLTLETLLHDEERYQETVHDVPSLHEVNRMIARSEEEVELFDQMDEELD
WAEDMTRYDQVPDWLRASTKEVNATIANLSKKPSKNALYGGAIGMDSTEVASETERKRGR
PRGKIPIYTELDEENGEFSEASSEDRNGYSIQEEEGEIGEFEDDESTEAPRVNKDQSEED
GPVSADGYEYQRALDSVRNNNIIEEAGSSGSSSHNRKLMRMVSPSVSSQKFGSLSALDSR
SNSRSKKLADELEEGEIAVSGDSPMDQQQSGSWIQEREEGEDEQVLQPKVKRKRSIRLRP
RHTTERSEEKHSDKSSLRRADPSQLPFQVDHKYKSQAREDRAHKVLGDTVSLKSDKNNSS
VKDKRTLVSRKQAANVQGSLKSGRVTYGSAPADDATENLNLDSKVVKGPKSTGNIMSEVI
QRKCKNVINKLQRRIDNEGHQIVPLLTELWRRIENSSGIGGAGDNILDLRKIQIRVDKFE
YSGVMELVSDVQLMLKCGMQYHGFSYEVRSEARKVHDLFFDILNVAFSDTDFREARNSMS
FSASVATPATGPSSRQAPAGPSKRQKSVKDVDSDNSPFQKPQSRAPFHTVESTKVRSYVP
HKESKLGSSSSRELSQPDDARLFTHPGDLVICKKKRKDREKSAAKSGSGSAGPLSPTGLG
RSIKSPGSISGAKDTGSSQQSSTQGWAALSPQQGNNSGGSVGWANPVKRMRTDAGRRRPS
HL
NT seq
6669 nt
NT seq
+upstream
nt +downstream
nt
atgcaatccggtactgggcgtcagcaaggtggaggcggggggcatgggcggagtacggct
ggatccgcctctgcttcaccatcctcctcttcctccgctgtttcagcctttgatcagcag
cagcagcaacagcagcaacaacaaagactgtctttgcagcaacaatttctgaggagacct
gaaggaaatgatgcccttctagcgtaccaagctggcaatgttcatggactccttggaggg
gctaattttcctgcagcatctgggtccatgcagctacctcaacaacccaggaagttcatc
gatctgggccaacagcatggtacttccaaggtcccagaacagagtcacagtaggagtcaa
ggtgttgagcaacaaatgttgaatcctatccaacaggcttacttacaatatgcattccag
gcagcccaacagaaatctgtacaatctcagcagcagatgaaaccaggaatgtttggttct
cttggaaaagatcaagaaatgcggatgggaaatatgcagatgcaagatctcgtttccatc
caatcagcaaattctcaggcatcctcctccaagaagtcatctgagcaggttgcgcagagt
gacaaacaggcagatcacagtcagcggcctgcgcccgaccatagaactgatccaaaattg
aatcatcctacactacttggccaagtaatcccatcggcacctatgttggggccacaatct
cagcaaaatatgatgaacatgacgagcaatctggctgcacagatgcaggcaatgcaggct
ttggcgcttgagcgtaatattgacctgtcacatcccgcaaatgcaaatgtaatggcacag
cttattcctctcatgcagaccagaatggttgctcagcagaaggcaaatgaaaatactgct
gctatgcagtctgtatcttttgcaaaacagcatgttacctcaccacagattggtaacgaa
agtagtccacatggtaactcgtcaagtgatgtctcagggcaatctggttcttctaaagct
aggcaggcagtttcccatagtaatctcggtgtaacttcaagtgcaactctagttaacaac
tctggcaacaaacctgtgcaacaattgtctatgcacggtagagacaaccacttgccccca
aggctgcctactttgctcggccatggaatacctcctgtgcatccatcacagtcatctggg
aatgtgagccaaggggttgaaagcgtagtagcaaaaacttcggccactgtcccagatgct
cctcaggttcaaaatggcaggcaatgcaatcgatctccacaatctgtaactccatctaat
gatggggatgcaggaattgcatcaacatctcagggtggatcagtttcccagatgcgacaa
tcacatgttgggtttaccaagcagcaactgcatgtacttaaggcacaaatactagcattt
aggcgcctaaagaaaggtgatggaactttgccacgtgaattgctccaagccattgcacca
ccaccacttgatttgcaggcacaacaggtatctccaccccctgtaagtgtttgcaaggat
agatcaggtggagaaaatgttaatgagcatgcaagaaatgtggaatcaactgagaagggg
cctcaggttgtaaaatcaccagcaggagtaagtaatttaaaagaagaaggttcaggggat
aacagggcagctgccttaacagttaacgtgcaaagctccacaaccacagcaagggagccg
agatttttggctcctcccgggaaagaagagcagcagagccttggtagttctgggaagtct
gaacaggatcctgagccaggcaaccagaaaactcctgtcaggggtgatgttgccgccgac
aggggtaaagcaattgccacacagtcaaatgtttcagattcaattcaagtcaagaaacct
attcaagcgagtaacacaacccagcctaaggatggtggttcgactagaaagtatcatggg
cctttatttgatttccctgtcttcaccaggaaacacgagactcttggatcctctatgatg
aacaataataataatttgaccctagcatatgatattaaagacctttttgctgatgaaggt
ggagagatccgtaaaaggaaaagagcagagaaaatagagaagattgataaaatacttgct
gtaaacttagagagaaagagaattagaccagatcttgtcatacggctacaaattgaatca
aaaaagcttcagcttgcagagtgtcaggcacgcttaagggatgagattgaacaacaacag
caagaaataatggctatgcctgatagaccatatcggaaatttgttcgactgtgtgagcgt
caacgtcaagagcttaacaggcaatcacaggccaatcagaaggcaattagggagaagcaa
ctgaaatccatattccagtggcgcaagaagcttcttgaggctcattggggcatccgtgat
gctcgaactgcccgcaatagaggagtccacaaatatcatgaaaggatgctgagggagttc
tccaagagaaaggatgatgaccgcaataaaaggatggaagctttgaaaaataatgatgta
gaaagatatagggagatgttgctggaacaacaaactaacatacctggggaagctgcagaa
agatatgctgttctgtcatcgtttttaacacaaactgaagagtatcttcacaagcttgga
agtaaaataacagctgctaaaaatcagcaggaggtcgaggaagcagctaatgctgctgca
gctgccgcacgtgcacagggtctttctgaagaagaagtaagagctgctgctgcctgtgcc
agagaagaagtgatgataaggaatcgcttttctgagatgaatgcaccaagagatagttca
tcagttaacaagtattacaatcttgcacatgctgtcaatgaaaaggtcattaggcagccc
tcaatgttacgagctggaacgctacgcgattatcagctggtgggtctgcaatggatgtta
tctttatacaacaacaaattaaatggaattttggctgatgagatgggtcttggaaagact
gtgcaggtcatggccttgattgcgtatttgatggagttcaaagggaactatggtccgcat
cttattattgttcctaatgctgttctcgtgaactggaagagtgaattgcacaattggctt
ccaactgtttcctgcatatattacgttggtgggaaggaccaaagatcgaaattgttttct
caagaagtgttagccttgaagtttaatgtcctcgtgaccacctatgagttcgttatgtat
gatcgttcaaaactttcaaaaattgattggaaatatattataattgatgaagcacaacgg
atgaaggacagagagtctgtattagctcgtgatcttgatagatatcgctgccaaaggcgc
ttgcttctcacagggacgccattgcagaacgatcttaaagaactttggtctcttctgaac
cttctgctcccagaagtctttgataatcgaaaagcattccatgattggttctctcaacca
ttccaaaaagaaggccccacgcacaatgctgaggatgactggctcgagactgagaagaag
gtgataattatccatagacttcatcaaattttagagccttttatgctcaggcgtcgtgtt
gaagatgtggaaggatcacttcctccaaaggtttcaattgttatgaaatgcagaatgtct
gcaatacagagtgccatttatgattggataaaatccactggcactcttagggttgatcct
gaggatgaaaggcgcaaggttcaaaagaatccaatttatcaggctaaaacttacaaaact
ttaaacaatagatgcatggagctaagaaaagcctgcaatcatcctttgctaaattaccca
tatttcagtgacttttcgaaggattttcttgtgagatcatgcggaaaattgtgggttctg
gacaggattttgattaagcttcagagaactggacatagggtgctgctctttagtaccatg
actaagcttcttgacataatggaagaatatttacagtggcgaaggcttgtattcagaaga
atcgatgggatgactagtttggaagaccgtgaaagtgctatcgtggaatttaaccgtcca
gatactgattgctttattttcttgctcagcattcgtgctgcaggacggggtctgaatctt
cagtctgctgacacagtcatcatatatgatccagatccaaatccaaaaaatgaggaacag
gctgtggctcgagcccatcgtattgggcagactagggaggtgaaagtcatttatatggaa
gctgtggtagacaaaatatccagtcatcagaaagaagatgaattcaggaacggaggaaca
gttgattcagatgacgaccttgctggcaaggaccgatacatgggttcaattgaaagtttg
attcgaaataatatccaacagtataagattgacatggctgatgaagttattaatgctggg
cggtttgatcagaggaccacacatgaagagaggcggctgactttggaaaccctgttgcat
gatgaagaaagataccaagaaacagttcatgatgttccatcgcttcatgaggtgaaccgc
atgattgccaggagcgaggaagaagtagagctctttgatcagatggatgaagaacttgac
tgggcagaggacatgactcgttacgatcaggttcctgattggcttcgtgctagtacaaaa
gaagtaaatgccaccattgcaaatttatcaaagaagccatcaaagaatgctttatatgga
ggagctattggcatggattccactgaagtagcctctgaaaccgagagaaaaagggggaga
cccaggggaaaaattcccatttatactgaattggatgaagaaaatggagaattttcagaa
gccagttccgaggataggaatggatattccattcaggaagaagaaggagaaatcggggag
tttgaagatgatgagtccactgaggcgcctcgagttaataaagatcaatcggaagaagat
ggtcctgtttctgctgatggatacgagtaccaaagagctttggacagcgtcagaaacaat
aatataattgaagaagcgggttcatctggatcatcttcacacaatagaaaattaatgcga
atggtatctccatctgtatcttctcaaaagtttggatcactttctgctttggatagtagg
tccaactcccgatcaaagaagttggcagacgagttagaagaaggagaaattgctgtctcg
ggggattctccaatggaccaacagcaatctggtagctggatccaagagcgtgaagaaggt
gaagacgaacaggtgttgcagcctaaggtaaaacggaagaggagtatacgacttcgcccc
cgtcatactacggagaggtcagaggagaagcacagtgacaagtcatctcttcgccgagct
gatccttctcagttgccgttccaggtggaccataaatacaagtctcaagcaagggaagac
cgtgcacataaggtccttggagatactgtttcactgaaatctgacaaaaataattcatcg
gtcaaggacaaacgaactttagtctcaaggaaacaagcagctaatgtacaggggtccctt
aaatctgggagagtaacttatggctctgctcctgcagatgatgctactgaaaatctaaac
ttggacagtaaagttgtgaaagggcctaaaagtactggcaatataatgtctgaggtcatc
cagagaaagtgcaaaaatgttataaataagctccagagaagaatagacaatgaaggtcat
caaatagtaccactgctaactgaactgtggagaagaattgaaaactccagtgggattggt
ggggcaggagataacattttggatttaagaaagatccaaatccgtgttgacaagttcgag
tacagcggagtcatggagcttgtatctgatgtacagcttatgttgaagtgtggcatgcag
tatcatgggttctcatatgaggtgagatcggaggcaaggaaagtccatgatctcttcttt
gatatattgaacgtagcattttcagacactgattttcgagaggccagaaattccatgtct
ttctctgcttctgttgctacaccagccactggtccatcttcaagacaggcgcctgctggt
ccaagcaagcgccaaaaatcggtaaaagatgtggattctgacaatagtcctttccagaag
ccgcagagtcgagctccctttcatactgttgaaagcactaaggtccggagctatgtccct
cacaaagaatcgaagcttggaagtagcagtagccgggagcttagccaaccagatgatgca
cgtctgtttactcatcctggggaccttgttatctgcaaaaagaagaggaaagatagggaa
aagtcggctgcaaagtctgggagtggatctgcgggtcctctctcccctactggcctaggt
cgtagtatcaaaagcccaggctcgatttcgggtgccaaggatacaggatcaagccaacaa
agttccacacaagggtgggctgctctgtctcctcagcaagggaacaacagtggtggctct
gttggatgggcgaatcctgtaaagaggatgagaactgatgctggaaggaggcgtcctagc
catttgtga
DBGET
integrated database retrieval system
