Sesamum indicum (sesame): 105172867
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Entry
105172867 CDS
T04135
Name
(RefSeq) RAB6A-GEF complex partner protein 1
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sind04131
]
105172867
Membrane trafficking [BR:
sind04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
105172867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIC1
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_RSE1_2nd
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
105172867
NCBI-ProteinID:
XP_011092768
UniProt:
A0A6I9U1Q9
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All DBs
Position
LG1:17870585..17885123
Genome browser
AA seq
1126 aa
AA seq
DB search
MYMAYGWPQVIPLEAPNCVSTQQIVYLKVVNRLLLVVSPTNVELWSSSQHRVRLGKYKRD
VDSIRKEGENLRAVWSPDTKLIAVLTSACYLHIFKVQITERKIHIGGKQPTGLFLANISL
LLSEQVPFANHNLTVSNFICDNKHFLIGLSDGSLYNISWKGEFSGAFFLDVWPNDKIGAN
KLSPHLGNGLTFSGTQGVDRTNHVNHVASRSSGVVHLEFSIMLRLLFVLFSDGELIQCSV
SKKGLRHADSITVERRVASGDVVCASVASEQQILAVGTRKGTVELYDLADSASLIRSVAL
HDWGYSVEDTGPVNCIAWTPDDSAFAVGWKLRGLTVWSVSGCRLMSTIRQIGLGSVSSPV
VKSNQDFKYEPMMGGTSMMHWDEHGYRLYAIEEGSSDRIVAFSFGKCCLNRGVSGTTYVR
QVIYGEDRLLIVQSEDTDELKILHLNLPVSYILQNWPVLHVAASRDGMYLAVAGVNGLIL
YDIRLKRWRVFGDVSQEQQIQCRGLLWLGKIVVVCNYVDSSDTYELLFYPRYHLDQSSLL
CRKPLLSKPVVMDVYQDYLLVTYHPFDVHIYHVKLTGELSPSSTPALQLSTVRELSIMTA
KSHPAAMRFIPDQLPRDYTLKSDISSSSDLLAREPSRCLMLRMNGDLSLLDLDDGREREL
TDSVELFWVTCGQSEEKNNLIEEVSWLDYGHRGMQVWYPSPGADPFKQEDFLQLDPELEF
DREVYPLGLLPNAGVVVGVSQRMSFSASTEFPCFEPSPQAQTILHCLLRHLLQRDKREEA
LRLAQLSAEKPHFSHCLEWLLFTVFDAEISRQNSSKIQAGVANHAPSLLEKTCDLIRNFP
EYYDVVVSVARKTDGRHWADLFSAAGRSTELFEECFQRRWYRTAACYILVIAKLEGPAVS
QYCALRLLQATLDESLYELAGELVRFLLRSGREYEPTNADSDRDSPRFLGYFLFPSSFRK
QPQDAKSSSFKEQSPHVSSVKNILESHASYLMSGKELSKLVAFVKGTQFDLVEYLQRERY
GSARLENFASGLELIGQKLHMGTLQSRLDAEFLLAHMCSVKFKEWIVVLATLLRRSEVLF
DLFRHDLRLWKAYSITIQAHAPFAEYHDLLEELEDKLSSSANAGGT
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgtatatggcatatggatggccgcaggtcatccccctagaagcacccaactgcgtctcg
acacagcagatcgtatatctcaaagtcgtcaatcggttgctcctcgtggtctcccccact
aacgtagagctttggtcttcttctcagcatagggtgagattggggaagtacaagagagac
gtggattctattcggaaagagggggagaatttgcgggcggtttggagtcccgacacgaag
ctcattgccgttcttacctcggcctgttatcttcacatttttaaggtgcaaatcacagaa
aggaaaatacatattggtgggaagcaaccgactggtttatttctcgcaaacatatcttta
cttctcagtgagcaagtcccgtttgcaaatcataatttgacagtgagcaattttatttgt
gataacaaacactttctgattggactgtctgatggatcactttacaacatatcgtggaag
ggtgagttttccggtgcgtttttccttgatgtgtggccaaatgataaaattggtgcaaat
aaattgtccccccacttgggcaatggtctgacttttagcggaactcaaggtgttgatcgg
accaaccatgtgaaccatgttgcatctcggagttctggggttgtccatcttgagttttcc
attatgttgcggttactatttgtgctgttttctgatggggaactcattcaatgttctgtc
agcaagaaaggtctaaggcatgccgattctattacagttgaaaggagggtggcttctggg
gatgtcgtttgtgcttcggttgcttcagagcagcagattcttgctgttggaaccagaaaa
ggaactgttgagttatatgaccttgcagattctgcatcacttattagatctgttgctttg
catgattggggatattctgtggaagatactggtcctgttaattgtattgcttggacacct
gatgactctgcttttgcagttggatggaagttaagagggcttacagtttggtctgtctct
ggctgtcgcttgatgtctacgatacgccagataggtctgggttctgtttcttctcctgtg
gttaagtcaaaccaggatttcaagtatgagcccatgatgggtggcacctcaatgatgcac
tgggatgaacatggatataggctttatgctattgaagaaggatcttcggacagaattgtt
gccttctcttttggcaaatgctgcctcaataggggtgtttctggtacaacctatgtccgc
caagttatctatggtgaagatcgcttgcttattgtacagtcagaagatactgatgaactc
aagatcttgcacctcaatcttccagtatcttatattctgcaaaactggcctgttctacat
gttgctgctagtagggacggaatgtatttggcagttgcaggggttaatggtttaatcttg
tatgacatacggctaaagcgctggagagtttttggagatgttagtcaggaacaacaaatt
caatgcaggggattgttatggctggggaaaattgtcgtggtctgcaactatgtggactct
tccgacacatatgagttgcttttctacccgagatatcaccttgatcaaagttcgctatta
tgtcggaagccattgctctcaaagccagtggtcatggatgtttatcaggactatttactt
gtcacatatcacccgtttgatgttcacatataccacgtgaaattaactggtgaactgtca
ccttctagtactccagctttacagctttctacagtacgagagctttcaattatgactgca
aagagccatccagctgcaatgcggtttatccctgatcagcttccacgggattatacgtta
aaaagtgatatctcatcctcttctgatttattagcccgagaaccatccagatgtttaatg
ctgcggatgaatggggacctttcactgcttgatttggatgatggaagagaaagagagctc
actgactctgtagagttattctgggttacttgtggtcaatcagaggagaaaaataactta
attgaggaagtttcctggttagactatggccaccgagggatgcaggtttggtatccatct
ccaggtgctgatccttttaagcaggaagacttcttgcagttggatccagagctggaattt
gatcgtgaggtatacccccttggtctacttccgaatgctggtgtagtagttggtgtttcg
cagagaatgtcattttcagcatctacggagttcccatgttttgagccatctcctcaagca
caaaccatattacattgtctacttcggcatcttcttcagagggacaagagggaagaagct
ctacgcctagcacaattatcggcagagaagccacatttttctcattgtctggagtggctt
ctttttacagtttttgatgctgaaatttccagacaaaattcaagcaaaatccaggcaggc
gtagccaatcatgctccctctcttttggagaagacatgtgatctgatcagaaactttcct
gaatattacgatgttgttgttagtgtagcacggaaaactgacggtcgacattgggcagat
ttattttctgctgctggaagatcaaccgagttgtttgaagaatgctttcagcgaagatgg
taccgcactgcagcctgctatatacttgtcattgcgaagcttgaaggtcctgctgtgagt
caatattgtgctttgcgtttactgcaggctacgcttgatgagtctctatacgaactggct
ggagagctggtgaggtttctgctaagatcgggcagagaatatgaacccacaaatgctgat
tccgacagagattctccaagattcttgggatattttcttttcccttccagttttagaaag
caaccacaggatgcaaaaagctcctcattcaaagaacagagtccacatgtttcttctgtt
aaaaatattttagaaagccatgccagctatttgatgtctggaaaagagctttcaaagctt
gttgcgtttgtcaaaggcacacaatttgatctagtggagtatctccaacgggaaagatat
ggaagtgctcgcttggagaattttgcttcagggcttgaactcattgggcaaaagctccat
atgggaacattgcaaagtcggctggatgcagaatttctcttggcccacatgtgctcggtc
aagtttaaagagtggatagtggtcttggccacattattgaggcgttctgaggtccttttt
gatttgtttagacatgacttgcgattgtggaaagcatacagcataaccatacaggcacat
gcgccatttgctgaataccatgatttgcttgaggagttggaggataagctttcatcgagt
gccaatgctggaggaacatga
DBGET
integrated database retrieval system
