Sesamum indicum (sesame): 105173078
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Entry
105173078 CDS
T04135
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
105173078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105173078
Enzymes [BR:
sind01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105173078
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
105173078
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
FAIM1
Motif
Other DBs
NCBI-GeneID:
105173078
NCBI-ProteinID:
XP_011093030
UniProt:
A0A6I9TZN5
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Position
LG11:419894..422609
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AA seq
321 aa
AA seq
DB search
MESSIECISSIDGIDEDEISHPHPFSEFSSPKSSHNTINNSNLNGGVINPATSVHELLEC
PVCTNSMYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKY
CSLGCPEIFPYYSKLKHEAVCNFRPYNCPYAGSECPVVGDIPYLVAHLRDDHKVDMHSGC
TFNHRYVKSNPRDVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEMEAR
NYSYSLEVGGNGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFFSGGDRKELKLRV
TGRIWKEQQNPDGVCIPNLCS
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggaatctagcatcgagtgcatatcatccattgatgggatagatgaagatgagatctcc
caccctcatcccttttctgagttttcatctccaaagtcatctcacaatactattaacaac
agcaatctcaatggtggggtgattaatccagccactagtgttcatgagcttcttgagtgc
cctgtttgtacaaattctatgtaccctcccatccatcagtgccacaatgggcataccctg
tgttctacctgtaaagcaagggttcacaacagatgccccacatgtaggcaggagcttggt
gatataagatgcttggcgctggaaaaggtggctgaatctctcgaacttccttgcaagtac
tgctcccttgggtgtcctgagatcttcccttactatagtaagttgaaacatgaggcggtt
tgcaattttaggccttacaattgcccgtatgctggatcagaatgcccagttgttggggat
atcccgtacctagttgctcatctgagagatgatcacaaggtggacatgcattctggatgc
acgtttaatcatcgctatgttaaatcaaatcctcgggatgtggagaacgccacgtggatg
ctaaccgttttccattgttttggtcagtatttttgtcttcattttgaagctttccaactt
gggatggcccctgtttatatggcttttcttcggttcatgggggacgagatggaggctcgg
aactatagctacagtttggaggttgggggaaatgggaggaaacttatatgggagggcacc
cctcgaagcgtcagagatagtcacagaaaggtgcgtgacagccatgacggcctcattata
cagcggaacatggcactttttttttcgggaggtgatcggaaagagctcaagctccgtgta
acagggcgaatatggaaagaacagcagaacccagatggagtttgcatacccaatctatgt
agttaa
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integrated database retrieval system
