Sesamum indicum (sesame): 105173138
Help
Entry
105173138 CDS
T04135
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
105173138
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sind04040
]
105173138
Ion channels [BR:
sind04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
105173138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
DUF1029
Motif
Other DBs
NCBI-GeneID:
105173138
NCBI-ProteinID:
XP_020553434
UniProt:
A0A8M8VAV0
LinkDB
All DBs
Position
LG11:complement(480299..484239)
Genome browser
AA seq
663 aa
AA seq
DB search
MERNMLEEVKSLRDGDHTRSNRPKSSPKKNVVDPQGPFLLMWNKMFVISCTISLFLDPLF
FYAPVVDAKNLCLSMDEKLKITACVLRSFLDIFYVFHIVLQFRTGFIAPSSRVFGRGELI
EDRRAIAKRYLSSYFIVDILSILPLPQVVILIVNAPISLPTNDLLKMVILAQYIPRSLRI
YPLSKEVTASGAVFADTAWPAAAYNLLQCILASHVFGALWYVIAIERKERCWRMACSDHN
GCKLEDLYCGVGRGDTSFLNSSCPLLEPDQIMSPADFDFGMFLYALKSHVVEQTDFTRKF
FNCFWWGWRNLSSLGQNLNTSNSVGEIIFALFISITGLVLVASVISSSIQKFVQSVAGRL
EEARMRRQDIEQWMSHRMLPQDLRARIRRYEQYKWQEKRGVEEQSLISNFPKDLRRDIKR
HLCWTLLTRVPVFERMDEQLLDAMCSCLKPVLYTENSFIFHEGDHVDEMLFIMKGNILTM
TTNRGGTSFFNSVYLTAGDFCGEELVTWALDPNSCSSLPISTRTVQAVKDVEAFCLTPDD
LKSVMSQFKHLHSKQLQHTYRFYSQQWRTWGACFIQAAWRQHYKRKIAKLLQEAEDTLQN
PLSKEGSGSLPSLAATVYASRFATNMLGNLRCNHPRNIISSPRLPPLLFQKPAEPDFSAG
NPS
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggaaagaaatatgttggaggaggtaaagagtttgagagatggcgaccacacacgaagc
aatagaccaaaatcaagccccaagaagaatgttgttgatcctcaagggccttttcttcta
atgtggaacaaaatgtttgttatttcttgtacgatttccttattcctggatccgcttttc
ttctacgcaccagtggttgatgccaagaacctatgtctatccatggacgagaaactgaag
atcactgcctgtgttcttcgctcattccttgacattttctacgtatttcatattgttttg
cagtttcgtactggattcattgccccttcttctcgagtatttggaaggggcgagctgatc
gaggatcgtagagcgatagccaaacgatatctctcgtcctacttcatcgtagacattttg
tcaattcttcctctacctcaggtagtcattctgattgtaaatgctccaatttctctaccc
acaaatgacctcctgaagatggttattttggcgcaatacatcccaagatctcttcggatt
tatcccttatccaaggaggtcacagcttcaggcgcagtatttgctgacacggcctggcct
gcagccgcttacaatctccttcaatgcatccttgccagtcatgtgtttggagcactgtgg
tacgtgatcgcgatagaacgcaaggagagatgttggcggatggcatgtagtgatcataat
ggttgtaagttagaggatctttattgcggggtgggccgtggagacacttcatttctgaat
tcttcatgtccgcttcttgagcctgaccagataatgagccctgcagactttgacttcggc
atgtttctttatgctcttaagtctcatgtggttgaacaaacagacttcactaggaaattc
ttcaattgcttttggtggggctggcgaaatttgagttcattgggtcagaatctgaataca
agcaattctgtaggagaaattatttttgccctcttcatctccatcactgggctggttctg
gttgcgtctgtcatcagcagcagcatacagaaatttgtacagtccgtcgctggtaggcta
gaagaggcgagaatgagacgtcaggatattgagcaatggatgtcccaccgcatgcttcct
caggacttgagggctcgtataagacgatacgaacagtacaaatggcaagagaaaagaggc
gtcgaggaacaatccttgatcagtaactttcctaaggatttgaggagggacatcaagcgc
catctctgctggactttattaacaagagtgccggtttttgagagaatggacgaacagttg
ttggatgcaatgtgttcttgtctaaagcccgttctctacacggagaacagctttattttt
cacgagggagatcatgttgatgagatgctattcataatgaaaggtaacatattgactatg
acaacaaatcgtggcggaaccagtttcttcaactcggtatatctcacagctggagacttc
tgtggggaagaacttgtgacatgggctctcgaccccaactcttgttccagccttcctatc
tcgaccagaaccgtgcaggctgtcaaagacgttgaggctttctgtttaacgccggatgac
ttgaaatctgtcatgtcccagtttaaacatctacacagcaagcagcttcagcacacttat
aggttctattcccagcagtggaggacatggggtgcctgctttatacaagcagcatggcgt
cagcattacaaaaggaagattgcaaagttgctgcaagaagcagaagatacactgcagaat
ccgttgtccaaggaaggatcgggtagtttgccaagccttgctgcaaccgtttacgcatca
agatttgccaccaatatgctaggaaacttgcgatgtaatcatccacgtaacataatttca
tctccaagattaccacctctactgtttcagaagccagctgagcctgattttagtgcagga
aatccttcatag
DBGET
integrated database retrieval system
