Sesamum indicum (sesame): 105173470 Help Entry 105173470         CDS       T04135                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism sind  Sesamum indicum (sesame) Pathway sind03040   Spliceosome Brite KEGG Orthology (KO) [BR:sind00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     105173470  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sind03019]     105173470    03041 Spliceosome [BR:sind03041]     105173470 Messenger RNA biogenesis [BR:sind03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      105173470 Spliceosome [BR:sind03041]  Complex B   Other components    Prp19-related factors     105173470  Complex C     105173470 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 Suf TPR_15 Mad3_BUB1_I TPR_19 ARM_TT21_C ARM_TT21 PPR Motif Other DBs NCBI-GeneID:  105173470 NCBI-ProteinID:  XP_011093520 UniProt:  A0A6I9UH26 LinkDB All DBs Position LG11:7002249..7007776 Genome browser AA seq 911 aa AA seqDB search MSISQDLYPSEEDYLYEEEVLRNPNSLKLWWRYLIARSEAPFKKRAIIYERALKALPGSY KLWHAYLRERLEIVRNLPITHSQFQTLNNTFERALATMHKMPRIWIMYLQSLTQQKLITK TRRTFDRALCALPVTQHDRIWEYYLIFVSQKGVPIETSLRVYRRYLKYDPGHIEDFIEFL INSELWQEAAERLAGVLNDDQFFSIKGKTRHRLWLELCDLLTQHASEISGLNVDAIIRGG IRKFTDEVGRLWTSLADYYIRRGLLEKARDIFEEGMTTVITVRDFSVIFDAYSQFEESML SIKMETLDDSDDEDNENGEEEEEEEEEDDRLDIEKLRKRIDKFWLKDDKDVDLRLARLEY LMDRRPELANSVLLRQNPHNVEQWHRRIKLFEGNPTKQILTYTEAVRTVDPMKAVGKPHT LWVAFAKLYESHRDVSNARVIFDKAVQVNYKTVDHLASVWCEWAEMELRHKNFKGALELM RRATAEPSVEVKRRVAADGNEPVQIKLHKSLRLWTFYVDLEESLGSLESTRAVYERILDL RIATPQIIINYAMLLEDNKYFEDAFKVYERGVKIFKYPHVKDIWVTYLSKFVKRYGKSKL ERARELFEHAVEMAPAESVKPLYLQYAKLEEDYGLAKRAMRVYDQATKAVPANEKLGMYE IYIARAAEIFGVPKTREIYEQAIESGLPDKDVKVMCLKYAELEKSLGEIDRSRALYKHAS QFADPRTDPDFWNKWHEFEVQHGNEDTFREMLRVKRSVSASYSQTHFILPEYLMQKDQMQ TLEEAKDVLKKAGMADDEMAALERQLVPSANETTANDTGRRLGFVSAGLQNGGETMANKE DIELPEDSDSEDDEKVEIAQKDVPTAVFGGLVRKRDETDEDVENGKSTVTESNNDGHLGA LERIKRMRRGA NT seq 2736 nt NT seq  +upstreamnt  +downstreamnt atgtcaatctcgcaagacctgtacccaagtgaagaggattatctgtacgaggaagaggtt ctccgcaacccaaacagccttaagctatggtggcgatacttaatcgcccgcagcgaagcc cctttcaagaaacgcgcaattatttacgagcgtgccctgaaagctttgcccggaagctac aagctatggcacgcttatctccgcgagcgcctcgagattgttaggaacttgcccattacg cactctcagtttcaaaccctaaacaacaccttcgaacgagctctcgccacgatgcacaag atgccgcgtatttggatcatgtacctgcagtcattgacacagcaaaagttgattaccaag acgcggcgcacttttgatcgagcattatgcgcgctcccagttactcagcatgataggatt tgggaatattatttgatttttgtgtcgcagaagggtgttccgatcgagacctctttgaga gtgtacaggaggtatttgaaatatgaccctggtcatattgaggattttattgagtttttg attaattcggagttgtggcaggaggcagcggagaggctggcaggggttttgaatgacgat cagtttttctcaataaaggggaaaacaaggcacaggttgtggttggaattgtgtgatctg ttgacacaacatgcgagtgagatatcaggattgaatgtggacgcaataattagaggaggg attaggaagtttacggatgaggttgggcggttgtggacatctttggcggactattatatc aggaggggtttgctggagaaggccagggatatttttgaggaaggaatgacaacagtgatt actgtgagggattttagtgttatatttgatgcatattcacagtttgaggagagtatgctg tccatcaaaatggaaactttggatgatagtgacgatgaggataatgagaatggagaggag gaggaggaggaagaagaggaggacgataggttggatatcgagaagttgaggaagaggatt gacaagttttggttgaaggatgacaaggatgtggatttgaggttggcaagattggagtat ctgatggataggaggccagagttggctaacagtgtgctcttgagacagaatcctcacaat gtagaacaatggcataggaggattaagctctttgagggaaatcccacaaagcaaattttg acttacacagaggcagtgaggacagtggacccaatgaaggctgtcggaaaaccacatact ctgtgggtagcatttgctaagttatatgagagccatagagatgtttccaatgctcgggtg atttttgataaggccgtgcaggtcaattataagactgtggatcatctagccagcgtttgg tgtgaatgggcagagatggagctcagacacaaaaattttaagggtgcattggaactgatg cgccgtgctactgcagaaccctctgttgaggtcaagaggagagtggctgctgatggcaat gaaccagtgcagataaagcttcataaatcccttaggctgtggacattttatgttgatttg gaggaaagtctgggcagcctggagtcaactcgtgcagtttatgagagaatattggatttg agaatagccactccccaaattataataaactacgccatgcttttagaagataacaaatat tttgaagatgcatttaaagtttacgagagaggcgtcaagatatttaaatacccacatgtg aaagatatctgggtcacttatctttccaagtttgtcaagagatatgggaagtcaaaattg gaacgagctcgggagttatttgagcatgcagttgaaatggcccctgcagaatctgtgaaa cctctatatcttcaatacgctaagctagaggaagactatggtctggctaaaagagcaatg agggtatacgatcaagcaaccaaggctgtcccagctaatgagaaattgggcatgtatgaa atttacattgcccgggcagctgaaatatttggtgtaccaaaaactagagagatttacgag caagctatagaatcgggcctgccagacaaggatgtgaaggtcatgtgtctaaagtatgct gaacttgagaagagccttggtgaaatcgaccgcagtcgcgcattatataaacacgcttcg cagtttgctgacccgagaactgatcccgacttctggaacaaatggcatgagtttgaggtg cagcatggaaatgaagataccttcagagagatgctccgagtgaaaagaagtgtatctgct agttatagccagacgcactttatcctaccagagtatttaatgcaaaaggatcagatgcag acccttgaggaagctaaggatgttcttaagaaagcgggtatggctgatgatgaaatggct gcccttgaaaggcagttagtcccctctgcaaatgaaaccacagcgaatgatactggtaga cgactagggtttgtgagtgctgggttgcagaacggaggggagacgatggcaaacaaggag gatattgaacttcccgaagatagtgactctgaagatgatgaaaaggttgagatagcacag aaagatgttccaacagcagtatttggaggtttggtgcggaaaagagatgagacggatgaa gatgtggaaaacggtaaatcaactgttacagaaagcaacaatgatgggcatctaggtgcc ctggagagaataaaaagaatgaggagaggcgcataa

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