Sesamum indicum (sesame): 105173540
Help
Entry
105173540 CDS
T04135
Name
(RefSeq) E3 ubiquitin-protein ligase ATL42
KO
K10664
E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:
2.3.2.27
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105173540
Enzymes [BR:
sind01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105173540
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
105173540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_11
zf-ANAPC11
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf_RING_Vps8_fungal
Prok-RING_4
zf-HC5HC2H
DNER_C
zf-RING_16
Rad50_zn_hook
Tn7_TnsC_Int
DUF4064
zf-RING_Vps41
zf-RING_4
RINGv
Tmpp129
Motif
Other DBs
NCBI-GeneID:
105173540
NCBI-ProteinID:
XP_020553315
UniProt:
A0A8M8V9Z0
LinkDB
All DBs
Position
LG11:7780753..7782341
Genome browser
AA seq
425 aa
AA seq
DB search
MITSFLLLQFIIIFLIDVKAQNPSESTEVMPPQDDSISNNFQPSLAVVIGMLSIMFALTF
ILLLYAKFCHRASSSGYNTTSHQIQDGLLRSRSAASGLDKTVVESLPFFRFSSLKGSRDG
LECSVCLAKYEDVEILRLLPKCRHAFHIGCIDQWLEKHSTCPLCRRKLSADDLTCSTSLR
FLWSQAEAREESNLELYVQREESRYGSSRFSIGSSFRKADRGSNKEEELPIQQGMDSDDE
NHKQPPLHRFNHKINVMSDVVLKHRWSNVSSSDLMFLNSEMLNDVSSARFSCLDEEIRED
DGIMNVKQEMGRKRELESKVREIRQADQAHNSFPFPTSSDSKQLPNPGFGSKALNPSEKR
SMSEIIVHPRFSTELVRSEASCVDVREERKRRLWLPIARKTVQWFANREGRAPQSQESNL
QNLNV
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgatcacatcatttcttctcctccaattcatcatcatcttcttgattgatgttaaggca
caaaatccttcggaaagcacagaagtgatgcctccacaggatgattcaatcagcaacaat
ttccagcctagtttagctgttgtgattggcatgttatcaatcatgtttgctctcaccttc
atcctacttctctatgccaaattctgccaccgggcgtcgtcgtccggctacaatactacc
agccaccaaattcaagacgggctgctccggtcccggtccgctgcctctgggctcgataag
acggtggttgagtccctccccttcttccggttctcgtctctcaaagggtcaagggacggc
ctggaatgctccgtctgtcttgccaagtatgaagacgttgagattctgaggctgctgccc
aagtgcaggcacgctttccacattggttgcattgaccagtggctagagaagcactcgacg
tgcccgctctgcagacggaagctgagcgcggacgatctgacgtgctcgacgagcttgagg
tttctatggagccaagcggaggcaagagaggaatcgaatctagagctgtacgttcaacga
gaggagagtcgttacgggtcctccagattcagcattggcagtagctttaggaaagctgac
agggggtcgaacaaagaggaggaattgcctatacaacaaggcatggattccgacgatgag
aatcacaagcagccgcctctccaccgattcaaccacaagatcaacgtcatgtccgacgtc
gtcctcaagcatcgctggagcaacgtcagctcctccgacctcatgtttctcaactcagag
atgctcaacgacgtttccagcgcaagattctcgtgtctggatgaggaaataagagaggat
gatgggatcatgaatgtcaaacaggagatggggagaaaaagggagttggagagcaaggtg
agggaaatcaggcaagccgatcaggcccacaattccttcccattccccacaagctcggat
tccaaacagttgccaaatccagggtttggatcgaaagccctgaatcccagtgagaagaga
tccatgtctgagataatagttcatccaagattcagcacggagttggtgaggagtgaagct
tcatgtgtagatgtgagggaggagagaaagagaaggctatggctgccgattgcaaggaaa
acagtacagtggtttgcgaatagagaaggaagagctccacaatctcaagaatcaaatctg
cagaatctaaatgtatag
DBGET
integrated database retrieval system
