Sesamum indicum (sesame): 105173661
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Entry
105173661 CDS
T04135
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit A isoform X1
KO
K07466
replication factor A1
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03030
DNA replication
sind03420
Nucleotide excision repair
sind03430
Mismatch repair
sind03440
Homologous recombination
sind03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
105173661
03420 Nucleotide excision repair
105173661
03430 Mismatch repair
105173661
03440 Homologous recombination
105173661
03460 Fanconi anemia pathway
105173661
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sind03000
]
105173661
03032 DNA replication proteins [BR:
sind03032
]
105173661
03400 DNA repair and recombination proteins [BR:
sind03400
]
105173661
Transcription factors [BR:
sind03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
105173661
DNA replication proteins [BR:
sind03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
105173661
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
105173661
MMR (mismatch excision repair)
105173661
DSBR (double strand breaks repair)
HR (homologous recombination)
105173661
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
Rep-A_N
REPA_OB_2
tRNA_anti-codon
DUF223
Motif
Other DBs
NCBI-GeneID:
105173661
NCBI-ProteinID:
XP_011093800
UniProt:
A0A6I9U173
LinkDB
All DBs
Position
LG11:complement(9029533..9033718)
Genome browser
AA seq
640 aa
AA seq
DB search
MPVNLTANAISAINGGDVNSKPLVQVLDIKLIGSTQERYRLLLSDSVATQHAMLATQLND
RVKTGGVRKGSVIQLIDYICSTVQNRKIIVVLNMETIIPDCDVIGNPKMFSEADSVPQKP
APDMPSGRPTSIKNNNVGVQTSALASFSHVKTSGFQNQGSNTQSFRPTVQPSYQPPPNYK
NHGAIMRNEAPARIIPIAALNPYQGRWAIKARVTAKGDLRRYNNARGDGKVFSFDLLDSD
GGEIRATCFNAVVDRFYDTIEVGKVYVISKGSLKPAQKNFNHLKNEWEIFLETASSVDLF
PDEDASIPRQQFSFRPISEIQHTESNSILDVIGVVVTVNPSVPILRKNGMETQRRILNLK
DQSGLSVELTLWGEFCNREGQQLQEMVETGNFPILAIKAGKVNDFTGKSVSTISATQLFI
NPDCSEANSLRDWFEHGGKEIASHSISREVMPGGSKNETRKTLAQIKDEGLGRSDKPDWI
TVKATISFIKTDNFCYTACPLMIGDRQCNKKVTKSGNSRWLCDRCNQEFEECDYRYLLQV
QVQDHTGLTWVTAFQETGEEILGCSAKDLYLLKYEAENDVKFTEIIRNCLFTEFLLRLKI
KEEIYGDEQRVKITVVKAEKVNYSEESRFLFDMIPKFQLR
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgaatctgacggcgaacgccatatcggcgataaacggcggcgacgttaattcg
aagccactggtgcaggtgttggacatcaagctcattggctccacgcaggagcgctaccgc
ctcctcctctccgattccgtggcaactcagcacgccatgctcgccactcagctcaatgat
cgggtgaagaccggcggagtccgcaagggatcggtcatccagctcatcgattacatctgc
agcactgtccaaaaccgcaagatcattgtggtactaaacatggaaacaattattcctgac
tgtgatgtaattggcaacccaaaaatgttctccgaagctgattcagtgcctcaaaagcca
gcacctgatatgccttctggacgaccaacatcaataaaaaataataatgttggtgtgcaa
acttcagcactcgcaagctttagccatgtaaaaacttcaggtttccagaatcaaggcagc
aacactcagagtttccgtcccactgtacagccatcataccaacctcctccaaattataaa
aatcatggggcaatcatgaggaatgaggccccagcacggattatccctattgctgctctg
aatccttatcaaggtcgatgggccatcaaggcacgagtgacagcaaaaggagatcttcga
cggtacaacaatgcaagaggagatgggaaagtattctcctttgatctcctagactcagat
ggaggggaaatccgggcaacatgcttcaatgccgtagttgaccgtttttatgatactatt
gaagttgggaaagtctatgtgatatctaagggtagcttgaaacctgcccagaagaatttc
aaccatctgaagaatgagtgggaaatatttttggaaacggcatcatcagtggatcttttt
ccagatgaagatgcttcaataccaaggcaacagttttcatttagacctattagtgaaatt
caacataccgaaagcaattctatactggatgtaattggtgttgtagtaactgtaaatcct
tctgttcctatcttgagaaagaatggaatggaaacacaaaggagaattctgaacttgaag
gatcaatctgggcttagtgttgagctgacattatggggagaattttgcaacagggaagga
cagcagttgcaggaaatggtagaaactggtaactttcccattttagctatcaaagctgga
aaggttaatgacttcactgggaagtctgtcagtaccatctccgcgactcagttattcata
aatccagactgttccgaggctaacagcttaagagactggtttgagcacggtggaaaagag
attgcttctcattccatatctagagaagttatgcctggtggatcaaagaatgaaacacgc
aagactttggcacagataaaagatgaagggcttgggaggtccgacaagccggactggatc
acagttaaggcaaccatatctttcattaaaacagacaatttctgctacacagcttgcccg
ttgatgatcggtgacaggcagtgtaacaagaaagtgactaagtcagggaactctagatgg
ctatgtgataggtgtaatcaagaatttgaagagtgtgattacagatacctacttcaagtc
caggttcaggatcatactgggttgacatgggtgactgcttttcaggaaactggtgaagag
atattgggttgctcagccaaggacttatacctgttaaaatatgaagctgaaaatgatgtc
aaatttactgaaattattcggaattgtctttttacggagtttctccttaggcttaaaatc
aaagaggagatttatggtgatgaacagagggtgaaaatcacagttgtgaaggcagagaag
gtgaactattctgaagaaagtagatttctgtttgacatgatcccaaagtttcaattgcgt
tga
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