Sesamum indicum (sesame): 105173715
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Entry
105173715 CDS
T04135
Name
(RefSeq) RRP12-like protein isoform X2
KO
K14794
ribosomal RNA-processing protein 12
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sind03009
]
105173715
Ribosome biogenesis [BR:
sind03009
]
Eukaryotic type
90S particles
Other 90S particles
105173715
Pre-60S particles
Other pre-60S particles
105173715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_ECM29
Hemerythrin
Motif
Other DBs
NCBI-GeneID:
105173715
NCBI-ProteinID:
XP_011093877
UniProt:
A0A6I9U1D0
LinkDB
All DBs
Position
LG11:complement(9499202..9509719)
Genome browser
AA seq
1289 aa
AA seq
DB search
MEGVEMEAAPPLHDSNEDFCSAVLSQFSNSNNEHHLHTCAAIGAMAQELEDQNLPLTPIA
YFGATCSSIDRLSSTADSPGHLLDSLITILSLVIDRLSPAVLKTKYVYLSGLLIRILRGK
SIQVNGVVPGLKCCSRLLIVREQVGWADVAELYSVLISYITDDRLKVRKQSHSCLRDVLE
YFQLVPMLSPLLAPASEAITNVFERFLLLAGGSSGNASEGSRAAQEVLYILDALKTCVPF
MSSKSSANILKYYKSLLELRHPIVTKRITDGLSALCIHSTGEISAEVLLDLLCSLAISVS
RDESSADSMTFTARLLDTGMKRVYSLNRQVCVVKLPVVFNALKDVLASGHEEALVAAVAT
FKNLINSCIDDSLIKQGVDQISVSANAGTRKSGPTVIEKVCVTIESLLGYQYEAVWDMSF
QIVSTMFDKLGKRSFYFMKEALKSLADMQKLPDGDFAFRKQLHECVGSALGAMGPEDFLN
ILPLNLEDLSEGNLWLFPILKQYTVGAHLSFFTKSILPMVGEMKRKSAMLEQEGKIQSAR
SVDGIVYSLWSLLPSFCNYPVDTAESFKALERALCTALQDEPDVRGIICSSLQILIQQNK
RILEGNENSPNIEVGIPERCAIALYTAHVAGSNLSILKSSARELLSVLTGVYFKSSKDTA
GILQSTIGELASISDKEVVTWFFKKTMQKLLKVTQEAGKSRSSKNSNLMQVDNSSHDGSL
STARGQLFDLAVSFLPGLDSKEIDLLFVAVQPALKDVDGLVQKKAYRVLSLVFQYSDDFI
SRKLEEVLSLMIEVLPSCHFSAKRHRLNCLYFLIIHVSKEGSEQRRHDITASFLTEIILA
LKEANKKTRNRAYDILVQIGHACGDEEKGGEKEKLHQFFNMVAGGLAGETPHMISAAMTG
LARLAYEFSDLISAAYNVLPSTFLLLQRKNKEIIKANLGLLKVLVAKSQTEGLQTHLRSM
VEGLLNWQDSTRNHFKAKVKMLLEMLVKKCGLDAVKEVMPEEHMKLLTNIRKLKERKERK
QAAKSVEDRSILSRATTSRISRWNHTKIFSDFDDGEMRNSDGELVDEKSISSRQSNYSSV
LQSKASLLRSKKSRKAAKSLQEDSFDQLDDEPLDLLDRQKTRSALRSSQLVNRKSDSDEE
PEMDADGRLIIHEDAKRKRADRKQKREVPSDTEVDGRSEAGSHLSANSKKTQKRMKTSES
GWAYMGKEYASKKASGDVKRKDKLEPYAYWPLDRKMVSRRPEHRAAARKGMASVVKLTKK
LEGKSASHALSMKGVMLKKSKKKGSQKKT
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgtcgaaatggaggctgcgccaccattacatgactcaaacgaggacttctgc
tccgccgtactctcccagttcagcaattcaaacaacgagcaccacctccacacctgcgcc
gccataggcgccatggctcaggaactggaagaccaaaacctccccctcacccccatcgcg
tactttggcgccacgtgttcctccatcgaccgcctctcctcaaccgccgactcccccggc
cacctcctggactccctaattactattctgagtctagttatcgacagactttccccagct
gtgctcaagacgaaatacgtttatctatccgggcttctaattcggattcttcgagggaaa
tcgatacaagttaatggcgttgtgcccgggttaaagtgttgttcccgattgctgatcgtg
agggagcaggtggggtgggcagacgttgcagagttgtacagcgtcctcatcagttacata
actgatgatcggctcaaggtaagaaaacaatcacattcatgtctccgtgatgtcctggag
tattttcaattagtgccaatgctttcaccattgctggcacctgcaagtgaagccattaca
aatgtctttgagaggtttcttctgcttgctggaggatcaagtggaaatgcttcggaaggg
tccagagcagcacaggaagtcctttacattctggatgctcttaaaacctgtgttcctttt
atgtcttcaaaatcatcggcaaacatcttgaagtactacaaatctctattggaactgaga
catcccattgttactaaacgcataacagatggtctcagtgccctatgtatccattctact
ggagaaatttctgcagaagtcctacttgatttgttatgctctttagctatctcagtctcg
cgcgacgagtcatctgctgatagcatgacatttactgctcgcttgctagacactgggatg
aaaagagtttattctctcaacagacaagtttgtgtggtcaagcttcctgttgttttcaat
gcgctaaaagatgtgttggcttctggacatgaggaggccttggtagctgctgtggcaaca
tttaagaacttaataaattcatgtatcgacgatagcttgataaaacagggtgtcgatcag
atttcagtcagtgccaatgcgggcacaaggaaatccggacccacagtcatagaaaaagtt
tgtgtaaccattgaaagcctgctcggttatcagtatgaagccgtctgggatatgtcattc
caaattgtttcgaccatgtttgacaaattaggtaaacgttctttttactttatgaaggaa
gcactcaagagtttagctgatatgcagaagttgccagatggagactttgctttcaggaag
cagttgcacgagtgtgtgggatcagctcttggagccatgggacctgaggacttcttgaat
attctgcctctaaatttggaagatctatctgagggcaacctttggctttttccaattctg
aaacagtatactgttggtgctcatttgagtttctttaccaaatcaattttacccatggtt
ggagaaatgaagaggaagtctgcaatgctcgaacaagaaggaaaaatacagtcagcaagg
agtgttgatgggattgtgtactccttgtggtcactgctaccatcattttgcaactatcct
gttgatactgctgaaagtttcaaggctttggagagagcactatgtactgcccttcaagac
gaacctgatgtccgtggtataatatgctccagcttgcagattcttattcagcagaataag
agaattctggaaggaaacgagaatagtcctaatattgaagtaggcataccagagagatgc
gctattgccctctatactgcacatgttgctggctctaacttgagtatattgaaatcctct
gctcgggagttattgtctgttcttacaggagtctactttaagtcttctaaagatactgct
ggcattttgcagtctacaattggagagcttgcttcaatatcggataaggaggtggtcaca
tggtttttcaagaaaaccatgcagaagcttctgaaggttactcaagaggctggcaaatca
agaagctccaagaactcaaatctcatgcaggttgacaactcatcccatgatggatcactg
tcaacagccaggggacaattatttgaccttgcagtttcctttttacctggcttagattcc
aaggaaattgatcttctatttgttgctgtacaacccgcactgaaggatgttgatgggttg
gtccagaaaaaggcctatagagtactgtctttggtgtttcagtactctgatgactttatt
tcaagaaaattggaagaggtgctcagtttgatgattgaggtgctgccatcatgtcatttt
tctgctaaacgtcacagactcaactgtttatacttcttgatcatccacgtttctaaggaa
gggtccgaacagaggaggcacgacatcactgcctctttccttactgaaattatactagcc
ctaaaagaggctaacaagaaaacaagaaatagagcatatgatattctcgtccagattggt
catgcatgtggagatgaggagaaaggcggcgagaaggagaaactacaccaattttttaat
atggttgctgggggcttggcaggtgaaacccctcatatgattagtgctgcaatgacaggc
ttagctcgcttagcttatgagttctcggatcttatttccgcggcttacaatgttcttcca
tccacatttctcctcctccaaagaaagaataaagaaataattaaggctaatttaggtctt
ctgaaggtattggtggccaaatcacaaacagaaggtctacaaacacacttacgaagcatg
gtggaagggttgctgaactggcaagatagcaccagaaaccatttcaaagcaaaagttaaa
atgcttcttgaaatgctggtgaagaaatgtggccttgatgctgtgaaggaagtcatgccg
gaagagcatatgaaactcctaactaacataagaaagctcaaggagcggaaagagaggaaa
caggctgctaaatctgtagaagacaggtccattctatcaagagcaactacatccaggata
agtagatggaatcatacaaaaatattttctgattttgatgatggggaaatgaggaacagt
gatggtgaattggtggatgagaaaagtatttctagccggcagagcaactattcctcagtg
ttacaatccaaagcatctttgttacggtcgaagaaatcccgtaaggcagcaaagagcttg
caagaagactcatttgaccaattggatgatgagcctcttgacttgcttgatcggcagaaa
acaaggtctgcacttcgatcgtcacagctggtaaataggaagtctgattcagatgaggaa
ccagagatggacgctgatgggcgtctgattattcacgaggatgctaagagaaaaagggcc
gataggaaacagaagcgagaggtgccctcggacactgaggtagatggaagaagtgaagct
ggaagtcacttgtctgcaaactcaaagaaaactcaaaagcgcatgaagacatcagagagt
gggtgggcttacatgggcaaggagtatgcaagtaagaaggcaagtggtgacgtgaagaga
aaggacaagctcgaaccttatgcatattggccacttgaccgtaaaatggtgagccgaagg
ccagagcatagagcagctgcgagaaaaggcatggcaagtgttgtgaagctaacaaagaag
ctggaaggaaaaagcgcctcacatgccctttccatgaagggagtaatgttgaaaaagagc
aaaaagaaaggcagccaaaagaaaacatga
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