Sesamum indicum (sesame): 105173837
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Entry
105173837 CDS
T04135
Name
(RefSeq) uncharacterized protein LOC105173837 isoform X1
KO
K24155
rabconnectin-3a
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04142
Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
105173837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sind04131
]
105173837
Membrane trafficking [BR:
sind04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
105173837
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
105173837
RAVE complex
105173837
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_WDHD1_1st
Beta-prop_EML
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WDR55
Beta-prop_WDR3_2nd
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_1st
EIF3I
Beta-prop_EIPR1
Beta-prop_IFT140_1st
Beta-prop_TEP1_C
ANAPC4_WD40
WD40_Gbeta
Motif
Other DBs
NCBI-GeneID:
105173837
NCBI-ProteinID:
XP_011094022
UniProt:
A0A6I9U911
LinkDB
All DBs
Position
LG1:complement(18391682..18407330)
Genome browser
AA seq
2487 aa
AA seq
DB search
MRAVSSAASPPAPPLDIISHLPLPLIKSQIIPPAPSRSESGSEPAVDFLLDFDGHSWIAY
GASSLLVISHFPNPLLEAETKVGPIYRQVIELSREAADCVSAVSWSPATPSVGELAVALG
DSIVLLTYTEDDTSSSSFCWSQTAILVQSVKVEAIEWTGSGDGIISGGIEVVMWRRKEKS
WEIAWSFKPIVPQVLVSTSWAADGLFATAPCSQVQVGGSSSPPNEARKCVLVCQGDGHTK
YPQAELHHPMPVGMIQWRPSTGKPSSRHARHALRSVLLTCCLDGAVRLWGEIDDGRIRRA
GKEYGDQKATKLSFCVIASVEVNQTLNGFLGSDVFVSWAKEVEGVTIIDKETCYYSCLDD
LQYDTAGRCEWLIGFGPKRVITLWAIHCLDDFTPVRFPRVTLWKKQELVSVEMEAGQLLV
HKVLMMRTRASGPPAVCSLVQLLPCNSFGWAQLYTQVSTSTEGKSANDGHVESPLTACAK
GVLEVEGHTGKILQIAIHPFSVEVELAASLDANGMLIFWSFSTFFNSHTGLPASTPSWKL
CGKVSVSDHSPNYMCLSWVPTLLGKDQVLLMGHANGIDCFIVKTSKNNDEKVQFHTLFSI
PFKLEGHEQRLSRISSIPLPSNRNGNSVSCKFLLVALWTDGFQALSWEITIHSCDSQGSC
CDEHLQTFESEYSGNKYSVSVDPRSSVFPVPHNDDVVTCCAVVCPSDLVLSVEQLSSAEE
MGSCSYAYHMITGCANGSLKLWQTMPAQSMNSDANWSLVGVLTSEQGPILSVSASACCRK
IAMASTTNNPSYFSSVSIWECMLVQSAGSFMLEDKLCFDGKIVALNWFRLGNGQLLLGVG
LENELRLYALQRHVGQDILKYETPLKRNAWICIAVYSGLPAISNFLWGPKGTAIVVHDEY
FSIFSHYLLLSDGPGSNGSMVSLISTASEKPPEKITGGQYQSQASMMMNTDGDLQSTVNT
EKCLPAYNSDARICFLSMSDIADIIGGSLPLFHPEALLINLCSGHWKRAFIALRHLVQHL
ASSNLSKQGYGAKMCYNIISPVPLSDYLEGLLSPSSNDKLFQWSSSQLQTTLSHFSQIGG
YDNPNSSLTSSSSRSEFNDFAKALERLYDYSYITEVEMMQALALIDLLQEVSNSHSDSAY
GSLDGPGRRFWVAVRFQKLYFARRFSRLPLAEELVASSGLIGWAFHSDCHENLFQSLLSS
EPSWEEMRSMGVGFWYTNVAELRVKMERLARQQYMKNKDPKACMLLYIALNRLQVLAGLF
KISKDDKDKPLAGFLSRNFQEDKNKAAALKNAYVLMSKHQLELAIAFFLLGGDASSAVTV
CAKNLGDEQLALVICHLIEGRGASLECNLISKFLLPSALSRGDFWMASFLEWLLGNYSQS
FLRMLGVEMGSEFDIAVLSSSTASFLDPSIGQYCLMLATKTSMKNAIGEFNAAVLCRWAT
LLSVTSFGRCGLPLEALECLSSSVSLSGGATHGNVMHSPTGNLVEMGKPSINQSSSNWIS
NELLCHIMSHCKLHLAMQYISNLLREHPSCVGTARFSIGEFINHDIDSEGLKKLLKEFED
HLAAAIAYFQQKFSLLPCHLISMIVLSLHHNGREFVGHYILVENIPKFLFQEKSSRPDNL
LLCPSNLLLKATEEISCLYVKYVIASCKNCFCSTYLTRNDESRFCWLGAWGFSNQGIAWT
FWYLRAMLRLFLRSYSEDILMLLFPLLCLLKCHLLFASACLKKNFEALLLLVRPIMVKLM
GGGAANEIKIEDLTKLLADIVEILAHNSLTDLGTHDQTNGEKQERSGVVPDDKIWHAANA
SLWMHMSRFLEHKLSTLPEVLDGSGSSPSQPDVDPNGNDLQLQVRLVSNTLVESLKLTCG
VISFYSSKKFATYLLQNVSNRTLLYFEDGLSLTGGEDNCQMSEDTKLLDRGNELDFEHLW
NTCTDPNLIRGVFLQEYRNWLPYFKEKSFGGWRDAYVNIMREFKSEETCDKEDRLGSPSR
ARGSPLACLSPDDHPFKNSGDKDLYDPKRVVPFQNPKEIYRRNGELLEALCLNSIDHSEA
ALASNKKGIIFFNWEDGVLHSDKSEYIWAEADWPHDGWAGSESIPVPTYVSPGVCLGIKK
GPHLGLGGATIGAGALPTPGRDLMGGGAFGIPGYAGGGSSRLGWGVQEGFDEFLDPPATV
DNIRTRAFASHPSRPFFLVGSSNTHIYLWEFNKDVATATYGVLPAANVPPPYALASVSAV
QFDHFGHRFVTAALDGTVCTWQLEVGGRTNVHPTESSVCFNNHTADVTYVTASGSIVAAA
GYSSNGVNVVVWDTLAPPTTSQASIMCHEGGARSLSVFDNDIGSGSISPLILTGGKGGDV
GLHDFRYIATGRTKKHKHLDTGEHNISASSSVDMWSKTGDQNRNGMLWYIPKAHSGSVTK
ISTIPNTSFFLTGSKDGDVKLWDAKMAKLVFHWPRLHERHTFLQPSSRGFGGVVRAAVTD
IQVVSHGFLTCGGDGFVKYIRFQDFPR
NT seq
7464 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcggttagttccgctgcttctccccccgcaccgccacttgatatcatctcccac
cttccgctccctttaatcaaatcccagatcattccacccgccccatcgcgatccgaatcc
ggatcagagcccgccgtcgattttttactggacttcgacgggcactcatggatcgcttac
ggcgcttcctctcttctagtaatctctcacttcccaaaccctctactggaggcagaaaca
aaagtcggcccgatttatcggcaagtgatcgaactatcccgagaagctgccgactgcgtc
tccgccgtgtcgtggtcccctgccacgccttctgtaggtgaactcgcagtggcattgggt
gactctattgtgttattaacatacactgaagacgatacttcgagcagttctttttgttgg
agccagactgcaatacttgtgcaatccgtgaaggtggaggctatcgaatggacaggttca
ggagatggaataatttcaggaggcatcgaggtcgtgatgtggaggagaaaggagaaatcc
tgggaaatagcctggtcatttaaaccaatagtgcctcaagttctcgtctctaccagctgg
gctgccgatgggctttttgcaacagcaccgtgtagtcaagtgcaagttggaggttcatct
tctccacccaatgaggctagaaaatgtgttttggtttgtcaaggtgatgggcacaccaaa
tatccacaagccgagctgcatcatcccatgcctgttgggatgatacagtggaggccgtca
acaggaaaaccatcaagtagacatgccaggcatgcattgaggtcggtcttgttaacttgc
tgtcttgatggagctgttaggttatggggtgaaattgatgatgggaggattagaagagct
ggaaaggaatacggtgaccagaaagcaacaaagttatctttttgtgtcattgcttcagtt
gaggtaaaccaaactctgaatggttttttgggctctgatgtctttgtaagttgggcaaag
gaagttgaaggagtgacgattattgataaagaaacttgctattattcatgtttggatgac
cttcagtatgatactgctggtaggtgtgagtggttaattggatttggtcccaaaagagta
ataacactctgggctattcactgtcttgatgattttactcctgtgagatttccaagggtt
actttatggaagaagcaggagttagtcagtgttgaaatggaagcaggtcaattgcttgtt
cataaagttttgatgatgaggactcgagcttccggccctcctgctgtttgctccttggtt
caattgttaccttgtaattcgtttggctgggcacaattatatactcaagtatcaactagc
acagaaggaaaatctgctaatgacggtcatgttgaaagtcctctgactgcttgtgcgaaa
ggagtacttgaagttgagggtcataccggcaaaattttacaaatagcaattcatcctttt
tccgttgaagtcgaacttgctgcttctttagatgcaaatggaatgcttatcttctggtca
ttttcaacctttttcaatagtcatacaggcctgccagcatcaacgccctcttggaaactc
tgtggaaaagtttctgtttctgaccactctccaaattacatgtgcttgagttgggttccc
actctgcttggtaaggaccaggttcttctcatgggacacgccaatggtatcgattgcttt
atagtcaagacttcgaaaaataatgatgagaaagtccaatttcacactttattctctatt
cccttcaagcttgaaggtcatgaacaacgactaagtagaatctcttcgattcctttacct
tctaacagaaatggaaactctgtttcttgtaaatttctgctggtagcattatggacagat
ggttttcaggctttgtcatgggaaataaccatccattcttgtgattcgcaagggagctgt
tgtgatgagcacttacaaacatttgaaagtgagtattctggtaacaaatattctgtctca
gttgatcctcgctcgtcagtctttcctgttccccacaatgatgacgtggtgacatgttgt
gctgtagtctgccccagtgacttggttctgtctgtagagcagctgagttctgctgaagaa
atgggcagctgctcctatgcatatcatatgataaccggttgtgctaatggcagtttaaaa
ctgtggcagaccatgccagctcaatcaatgaactcagatgcaaactggagtcttgttggc
gttcttacttcagagcaaggtcctatcctgtcagtatctgctagtgcttgttgtcgaaag
attgcgatggcctccacaaccaacaacccaagctactttagttcagtttctatatgggag
tgcatgcttgtccagagtgcaggcagcttcatgctagaagataaactatgctttgatgga
aagattgtagccttaaattggtttaggttgggaaacggtcagttattgcttggggttggt
ttagaaaatgaattgcggttatatgccctgcaacggcatgtaggtcaagatattttgaaa
tatgaaactcctttgaaaagaaatgcttggatttgcattgcagtttatagtggtttgcct
gctatctccaacttcctttggggccctaagggcacagccatagttgtccacgacgagtat
ttcagcatcttcagtcactatttattattatctgacggtcctggctccaatggaagcatg
gtttctctaatttctactgcttctgaaaaaccacctgagaagatcactggaggacaatat
cagtctcaggcttctatgatgatgaataccgacggtgatttgcagtcaactgtaaatact
gaaaaatgtctgccagcatacaactcagatgccagaatatgtttcttgagcatgtcagac
atagcggacattataggaggatctctgcctctatttcaccctgaggcactcctgattaac
ttgtgttcaggtcactggaaacgtgcatttattgctttgcggcatcttgtccagcacctt
gcttctagcaatttgtctaaacaaggatatggtgcgaaaatgtgctacaatataatctca
ccagttcccctatcagattatcttgaagggcttctctcacctagttcaaatgataaatta
tttcagtggagcagttcacagctgcaaacaacgctatcacacttttctcagattggtggt
tatgataatccaaattcttctttgacttcgtcttcgtccagatctgaatttaatgacttt
gccaaagctcttgagaggttgtacgattattcatacataactgaagttgaaatgatgcag
gctcttgccctaattgatcttttacaagaagttagtaattctcactctgattctgcttat
ggaagtcttgatggacctggcagaagattctgggttgcagtgaggtttcaaaaactatat
tttgctcgaagattcagtagattgccactggcagaagagttggttgcttcttcaggactg
attgggtgggcttttcattcagattgtcatgaaaatttgtttcagtctctactatcatca
gagccgtcttgggaagaaatgcgtagtatgggcgtggggttctggtatactaatgtggca
gagttgcgggttaagatggaacggctggctagacaacagtacatgaaaaacaaagatcct
aaggcctgcatgctcctttacatagcattgaacaggcttcaagttttggctggcctgttc
aaaataagcaaagacgataaagataaaccattggctggatttctgtctagaaactttcag
gaggataaaaataaggcagcagctctaaaaaatgcttatgtgctgatgagtaaacatcaa
ctagaacttgcaatagctttctttttgctcggaggagatgcttcttcagctgtcacagtc
tgtgctaaaaaccttggagatgaacagcttgcccttgtaatttgtcatctcatcgagggg
cgtggtgcctctttagagtgcaatcttatttcaaaatttctcctcccatccgcgttgtcg
agaggcgacttctggatggcaagttttttagagtggttattgggaaattattcccaatct
tttttgagaatgctgggtgtcgaaatgggttctgaatttgatattgcagtcctctcatcc
tctactgcttcttttctggatccaagcattggtcaatattgcctaatgttggctacaaag
actagcatgaaaaatgctattggggagtttaatgctgctgttttatgtcggtgggcaact
ttgttgagtgttacttcctttggcagatgtggcctacctcttgaagctctggagtgcctc
tcttcatctgttagcctctctggtggagctacccatggaaatgtgatgcatagcccaact
ggcaatcttgttgaaatggggaagccatcaataaatcaaagttcctcaaactggatctca
aatgagctgttgtgccatattatgtcgcattgtaagttacatttggccatgcagtatata
tcaaatttgttaagagaacatccaagctgtgtaggcactgctaggttttctattggagag
ttcataaaccacgatattgacagtgaaggacttaagaagttactgaaggaatttgaagac
catttggctgcagctattgcatatttccagcagaaattctctttgcttccgtgccattta
attagcatgattgtattatctttgcaccataatggtcgagaatttgttgggcactatata
ttggtagagaatattccgaaatttctatttcaagaaaaaagtagccgacctgataacttg
ttattgtgtccatccaatctcctcttgaaagccactgaagaaatctcctgcttgtatgtg
aaatatgtcattgcctcttgcaaaaactgcttttgctcgacatatttgaccaggaatgac
gaaagcaggttttgctggcttggtgcttggggtttttccaatcaagggatagcatggaca
ttttggtatctgagagccatgttgcggttgttcctcagatcctactccgaagacattctg
atgttactttttccacttctttgtttgttgaaatgccatttactttttgcttcagcttgc
cttaagaaaaactttgaagcccttctattacttgttagacctattatggtcaaattaatg
ggagggggtgcagccaatgagatcaagattgaagatctgactaaacttcttgctgatatt
gtggagatccttgctcataattcactgacagacttaggaacacatgatcagaccaatgga
gaaaaacaggaacgaagtggagtagttccagatgacaagatatggcatgctgcgaatgct
tctttatggatgcatatgtctagatttttggaacataaactcagtacattgcctgaagta
cttgatggaagtggctcttccccatctcaacctgacgtagatcccaacggcaatgactta
cagctacaggtcagattggtttcaaatactttggtcgagtctctaaagctcacctgtgga
gttatttctttttatagttcaaagaagttcgcgacatacctgcttcaaaatgtatcaaac
agaacccttctctactttgaagatggtctgtctctaacaggaggtgaagataattgtcag
atgagtgaagatacaaaattgttggaccgtggcaacgagttagattttgaacatttatgg
aatacttgtacggatccaaacttaattcgtggagtttttttgcaagaatatcgtaattgg
ctaccttattttaaggagaagtcatttggtgggtggcgtgatgcatatgtaaacattatg
agagagttcaaatctgaggaaacttgtgataaagaagacagacttggtagtcctagtcgt
gcaagaggatcacctttagcctgtttatcgccagacgatcatcctttcaaaaattctggt
gacaaagatttatatgacccaaagagggttgtgccttttcaaaatcctaaagaaatatat
agaagaaacggagaacttctggaggctttgtgcttaaactcaattgatcactctgaagct
gcacttgctagcaataagaagggtataatatttttcaactgggaagatggagttctccat
agtgataaatctgaatatatctgggctgaagctgactggccccatgatgggtgggctggg
tctgagtctatcccagttcctacatatgtttctcctggagtgtgtctggggattaagaag
ggtccacatcttgggttaggtggggctacaattggtgcaggtgctttgcccacaccaggc
agggatttaatgggtggtggagcctttggcattcctggttatgctggcggaggatcatca
cgccttggttggggggtccaagaaggttttgatgagtttcttgatccacctgcaacggtg
gacaatatcaggacgagggcatttgcatctcatccatctaggcctttcttcttagttggt
tccagcaatactcacatatacctgtgggagtttaacaaggatgtagctactgctacatat
ggagtacttccagctgcaaatgttccaccgccttatgcccttgcttctgtgtctgcggtg
caatttgatcactttggacaccgattcgtgactgctgcattagatggaactgtatgcaca
tggcagcttgaagttggaggaagaactaatgttcatcctacagaatcttctgtctgcttc
aacaatcatacagcggatgtgacttatgttacagcgagtggatcaattgttgcagctgct
gggtacagctccaatggtgttaacgtagttgtatgggacacacttgctcctccaaccaca
tctcaagcttctataatgtgtcatgaaggtggtgcgcgttctctttctgttttcgataat
gacataggaagcggttccatttctcctcttattttgactggcggaaaaggtggtgatgtt
ggacttcatgacttccgctatatagcaacgggaaggacaaagaaacacaaacacttggac
actggcgaacataacatcagtgcttcatcttctgttgatatgtggagcaaaactggggac
cagaatagaaatggaatgctttggtacataccaaaggctcactcagggagtgtcaccaaa
atatctacaattccaaataccagttttttcttgactgggagcaaggatggagatgtaaaa
ctttgggatgcgaagatggccaagttagtatttcattggccgagattgcatgaaaggcac
accttcttgcaacccagctctcgtggttttggtggagttgttagggctgcagttactgat
attcaggttgtttctcatggtttccttacatgcggtggagacggttttgtaaaatatatc
aggtttcaagattttcccaggtga
DBGET
integrated database retrieval system
