Sesamum indicum (sesame): 105173898
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Entry
105173898 CDS
T04135
Name
(RefSeq) RNA-binding KH domain-containing protein PEPPER
KO
K21444
poly(rC)-binding protein 3/4
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105173898
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
105173898
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
MOEP19
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
105173898
NCBI-ProteinID:
XP_011094105
UniProt:
A0A6I9U8Q1
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Position
LG11:10410986..10415840
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AA seq
466 aa
AA seq
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MASTRPAIDNGAVAAEPVVPTSTAAEQSVVAEAAETNGEEAEAASTEAPAATETTEADEK
EKELAEVKAKWPGWPGYSVFRIVVPVLKVGGIIGRKGDLIKKLVEETRARVRVLDGPITS
PDRIVLVSGKEEPGAALSPAMDAIIRIFKRVNGLPENDGDGKTAGAAFCSIRLLVASTQA
ISLIGKQGSLIKSIQENTGASVRVLSNDDMPVYASSDERIVELQGEGLKVLKALEAVVGH
LRKFLVDHSVLPLFEKSYNAPTTQERQVDTWTDKTLLHATPQTSRGADYPVSIKRDSLFL
DRESQIESHIASSRHSLYVPDHSLGSRSSTIGRSGGPVVTQMSQTMQIPLAYAEDIIGVQ
GANIDYIRRTSGAILTVQESRGLPDEITVEIKGTSSQVQAAQQLIQEFTSSGHREPLPGS
YGKLESSLRPSYSQLGSSSYSSSSFSGQPYGGYSSSGIGGYSSFRL
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atggcctccactcgacccgccatagacaacggcgctgtcgccgctgaacccgtcgttccc
acctccacggccgccgaacaatcagtagtagctgaggcagcagaaaccaatggcgaggaa
gctgaagctgcgtcgacggaggctcccgcggccactgagacaacggaggctgatgaaaaa
gagaaggaattggcggaggttaaagccaaatggcccggttggccggggtactcggtgttt
cggatagtggtaccggtgttgaaagtgggtggcataattgggcggaagggggatctcatt
aagaagctcgttgaggagacacgcgctagggttcgggttcttgacggccccataacctct
ccggatcgcattgttttggtatctgggaaggaagaaccaggggcagccttgtctccagca
atggatgctataataagaatcttcaaacgtgttaacgggctacctgagaatgatggtgat
ggcaaaactgctggtgctgcattttgttcaattcggttgttggtggcctcaactcaggcc
ataagtttaataggaaaacaaggatccttgataaagtctattcaggaaaacaccggtgct
tctgttcgggtgctttcaaatgatgatatgccagtttatgccagttctgatgaaaggatt
gttgagttacaaggggaaggcctgaaggttcttaaagctttggaagctgtggtgggtcat
ctgagaaaattcttggtggatcacagtgttcttcccttatttgagaagagttataatgcg
ccaaccactcaggaaagacaagtagacacttggactgacaagacgttgctgcatgctact
ccacagacctcacgaggggctgattatcctgtttcaataaagagggattcactctttctt
gaccgtgaaagccagatagaatcacatattgcgtcttctagacattcactgtatgtccca
gatcacagtcttgggagtcgttcctcaacaataggacgttctgggggacctgttgttact
cagatgtcacagactatgcaaatacctcttgcttatgcagaggatattattggggttcaa
ggagcaaatattgattatattcgacgtactagtggtgccattcttactgtgcaagagagt
agaggcctaccagatgaaatcaccgtcgaaattaaaggcacctcttctcaagttcaagcc
gcccagcaacttattcaggaattcaccagtagtggtcacagagagccacttccaggcagt
tatgggaagctggaatccagtctgaggccttcttactctcagttaggcagcagttcttac
tcatcatcgtcgttctcaggacaaccttatggtggctacagctcatcaggcattggagga
tatagtagctttaggctataa
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