Sesamum indicum (sesame): 105174180
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Entry
105174180 CDS
T04135
Name
(RefSeq) probable pectate lyase 5 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind00040
Pentose and glucuronate interconversions
sind01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105174180
Enzymes [BR:
sind01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105174180
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Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105174180
NCBI-ProteinID:
XP_011094500
UniProt:
A0A6I9U9Y9
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Position
LG11:12592722..12598132
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AA seq
497 aa
AA seq
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MLPQNCILLFCLFFISLSSFVGATGVLNLTLPHQHPDPESVAQEVKRKVNASISKRRQLL
ATPVISAQSQCLTGNPIDDCWRCDPNWASNRQHLADCAIGFGKAAMGGKGGQFYVITDSS
DHDTVNPTPGTLRHAVIQDEPLWIVFKYNMVIKLKHELIVNSYKTIDGRGANVQITGNGC
ITLQYVSNVIIHNVHVYNCMPSGNTNIRSSPTHIGWRGKSDGDGISIFGSRNIWIDHCAL
SHCTDGLVDAIMGSTAITISNNYFSHHDEVMLLGHDDKYLPDSGMQVTIAFNRFGEGLVQ
RMPRCRRGYMHVVNNDFFEWKMYAIGGSASPTINSEGNRYTAPADPSAKEVTKREDTNEG
EWSDWNWRSDGDIMVNGAFFVPSGEGLSMQYAKASSVEPKSATLIDQLTMNAGVLGGPRD
NSISMSSGGGTTSTGASGGSSGGGSRGDGDYFGMIFAGGAAVKETSPPNAVFLSFLIILI
LYVTTNHGDADGGGLND
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgcttcctcagaactgcattctcttgttttgcctcttcttcatctctctctcttctttt
gttggagcaactggtgtcttgaatctcacacttcctcatcagcaccccgaccctgaatct
gtggcccaagaagtcaaaaggaaagtgaatgcatccatatctaaaaggcgccaacttctt
gccacccctgtaatcagtgcccagtctcaatgcctgacaggcaaccccatagacgactgt
tggcgctgtgaccccaactgggcttccaaccgccagcacctagccgattgtgccattggc
tttggcaaggcagcaatgggtggtaaaggaggtcaattctatgtcattactgattcgtca
gatcacgatacggtgaaccccacccctggcacccttcgccatgcagtcatccaagatgag
cccctctggatcgttttcaagtataacatggttatcaagcttaagcatgagttgattgtg
aacagctataaaactatcgatggccgtggagccaacgtgcagataactggaaacggctgc
attactttgcaatatgtcagcaatgttatcatccacaatgtgcatgtgtataattgtatg
ccatctggcaatactaatataaggtcaagtcctacacatattggatggagaggtaaatca
gatggcgatggtatatcgatctttggttccaggaatatatggattgatcattgtgctttg
tcgcattgtactgatggcttggtggacgctattatggggtctacggctatcacaatatcc
aataactacttttctcaccacgatgaggttatgcttcttggacatgacgacaagtatttg
ccagactcaggaatgcaggtgacaatagcttttaatcgcttcggcgaggggctggtgcag
aggatgccaaggtgccggaggggttacatgcatgtcgtgaacaatgatttttttgaatgg
aaaatgtatgcaattggaggaagtgctagccccaccatcaatagtgagggcaatcgttat
actgcaccagctgatcctagcgctaaggaggtgacaaagcgcgaggacacaaatgagggg
gagtggtccgactggaactggaggtcggacggggacataatggtaaatggtgcattcttt
gtgccatccggtgaagggctcagcatgcagtatgccaaagcatccagtgttgagcccaaa
tctgctaccctcatcgaccaactgaccatgaacgctggtgttcttggtggccccagggac
aacagcatcagcatgtcatccgggggtgggacgacctccaccggagcaagtggcggcagc
agtggtggtggtagtcgcggggatggtgactacttcggaatgatatttgcagggggggct
gccgtaaaagagacatcaccaccaaacgctgtgtttttgtctttcctaattattctaatc
ttgtatgttactaccaaccatggcgatgcggatggtggtggcttgaatgattga
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