Sesamum indicum (sesame): 105174252
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Entry
105174252 CDS
T04135
Name
(RefSeq) probable pectate lyase 12
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind00040
Pentose and glucuronate interconversions
sind01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
105174252
Enzymes [BR:
sind01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
105174252
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
105174252
NCBI-ProteinID:
XP_011094589
UniProt:
A0A6I9U5V7
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Position
LG11:12964183..12967170
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AA seq
477 aa
AA seq
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MEMVCSSGIVFLLLVGSFSHLGWAMLNLTLPLPGQHPSPEAVAHEVHRKVNASISRREML
SYTTNDQSNCLTGNPIDDCWRCDPNWHLNRQRLADCAIGFGQYALGGKGGRYYVVTDSSD
HDPVNPKPGTLRYAVIQTEPLWIVFASNMLIQLSEELIFNSYKTLDGRGANVHIIGGGCV
TLQYITNVIIHNIHIHHCYQAGETNIRSSPTHYGWRTKSDGDGISIFGARDIWIDHCSLS
HCKDGLIDVVMGSTGITISNNLFSHHNEVMLLGHSDDYLPDSGMQVTIAFNHFGKKLIQR
MPRCRRGYIHVVNNDFTRWEMYAIGGSGNPTINSQGNRYIAPYDRNAKEVTKRVDTSEDE
WRGWNWRSEGDIMVNGAFFVASGQGVEVKYEKAYSVEPKSAAYIDQITLNAGVLGNRGNN
LGKWTAGNNDSGAYLDANSGIFEDYDEYSGSQRPYTDSSTLTTFVTLLLIVLFLSMK
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggtgtgcagcagcggcattgtgtttctgttgcttgtgggctcattttctcat
ctgggctgggcaatgctcaacctcactctcccactccccggtcagcaccctagccctgaa
gctgttgctcatgaagttcacagaaaagtgaatgcatcaatttcaagaagagaaatgcta
tcttacaccaccaacgaccagtccaactgcctcactggcaatccaatcgacgactgctgg
cggtgcgaccccaactggcacctgaaccgccagcggttagccgactgcgccattggattc
ggccaatacgcccttggtggcaagggtggccgctactacgtcgtaacagactcctcggac
catgaccccgtcaaccctaaacccggcacgctccgctatgcagtcatccaaaccgagcct
ctgtggatcgtgtttgcctccaacatgctcattcagctctccgaggagctaattttcaac
tcctataagacccttgatggccgaggcgccaacgtgcacatcatcgggggcggctgcgta
accttacaatacataaccaatgtcataatccacaacatccacatacaccattgctaccaa
gctggggagactaatatacggtcgagccccacgcactacggttggcgcacgaaatcagat
ggagatgggatctcaatctttggagctagggacatttggattgatcattgttcgttgtcg
cattgtaaggacggattgatcgatgttgtgatgggctcaacagggatcacaatttcaaac
aaccttttttcgcatcacaacgaggtgatgctgttgggccacagcgacgactacttgcca
gactcggggatgcaagtgactatagcttttaaccattttggcaagaaacttatacaaaga
atgccaaggtgtagaagagggtacatacatgtggttaataacgacttcacgaggtgggaa
atgtacgcgattggaggtagtgggaatccgaccattaacagccagggaaatcgttacatc
gccccatatgatcgcaatgctaaggaggtaacaaaaagagtggacacgtcggaggatgaa
tggaggggctggaactggaggagtgagggggatataatggtaaatggagcgttcttcgtg
gcatctggacagggagttgaagtgaaatacgagaaggcctacagcgtggagccgaaatct
gcagcctacattgaccaaatcaccctcaacgctggtgttcttggcaacaggggcaacaat
ttggggaagtggacagccggaaacaatgattctggagcttatttggatgcaaattcaggc
atattcgaggactacgatgaatattcagggagccagaggccttacactgatagttccact
ctcacaacttttgtaacactcctgttaatcgttttgtttctaagtatgaaatga
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