Sesamum indicum (sesame): 105174257
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Entry
105174257 CDS
T04135
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3 isoform X1
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
sind
Sesamum indicum (sesame)
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105174257
Enzymes [BR:
sind01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105174257
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105174257
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
zf-RING_UBOX
zf-C3HC4
Beta-prop_NUP159_NUP214
zf-RING_Vps41
zf-rbx1
zf-RING_5
zf-C3HC4_2
Rtf2
zf-UDP
zf-ANAPC11
TPR_MLP1_2
WDR55
zf-Nse
RNase_Y_N
SPAM
Ax_dynein_light
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
105174257
NCBI-ProteinID:
XP_011094594
UniProt:
A0A6I9U5W2
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All DBs
Position
LG11:13003580..13012466
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AA seq
642 aa
AA seq
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MWDPDYMNYLEQHVVDPPSDPDDDDYDDDDDEEEEEDNDDGVDADGRSGTTLRQVLYGNH
RNDMNSVTATVSNQEVVDVDSQVSENDDDAIVEGGRESSSQATDNTGSKGGGTALKGGND
GGNEGELNMGDIDGLFCSICFEAWSSGGDHHVCCLPCGHIYGLACIKKWLRRQGSSKCPQ
CKKKCGIKDIRLLYASRIVAIDGELQKKVQSLEAKCSSLEKKQKAEWSKKEVEWKKREAS
LRRQVQDLEQRNHDLADLLEDTERTASGLSASGCNSRGESILGFDANAQFNMRGCSNKFI
MQKDFQVDGARLFDIDSSGQIFVIARRLSGMGGAHVLTKVSLLSNNDKEDIWLPENTKAV
KDLQISPHARLVLLASLGKKLSVLSTESNNAVLTYELPAAAWSCSWDISSSHYAYAGLQN
GTVLQFDMRYTMRHVQSFSGLTCNPIHTLYSLLPKSSLSSGVRSVLSASSLGLCQWNFGG
SEDRPYLIPESDEHGVCISLAFCKSSDDIVASYRPKIEISGDLDFCQPTLTAPGQRTRGS
HVLYRKMGCTYKKLGATCANVSDIRLPKSTIIDGVYRNPVFASSDELTSELVLQELPSLM
VVEHLKPKKYPIRDVKYHRQLSSGLLSCLTEDSLQLFTAKPL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtgggatcccgattatatgaactatttggaacagcatgttgtcgacccgccctcagat
cccgatgacgacgattacgatgatgacgatgacgaagaagaggaggaggataatgacgat
ggtgttgacgcggatggtcggtctgggacgacgttgcgtcaggtgttgtacggtaatcac
aggaacgatatgaattctgtcactgctacggtgtcgaatcaagaagttgtggatgttgac
agtcaggtttcagagaatgacgatgatgcgatagtggagggtggacgtgaaagcagcagc
caggcaacagataacaccgggagtaaagggggtggaacggcgttgaagggtggcaatgat
ggaggtaatgaaggagagttgaatatgggtgacattgatggactgttttgctccatctgc
tttgaagcttggtcttctggtggtgaccaccatgtctgttgtttgccatgtggtcatata
tatgggttggcttgtatcaagaaatggttgcgacgccaaggctcaagcaagtgcccgcaa
tgtaaaaagaaatgtgggataaaggacatccggctactttatgcgagtcgaattgttgcc
attgacggagagcttcaaaagaaagtacaatcacttgaagctaaatgctcgtctcttgag
aaaaagcagaaggctgaatggtcaaagaaggaagtagaatggaagaagagagaagctagt
ttgcgcaggcaagtgcaagacctcgaacagaggaatcatgacttggcggatcttttagaa
gatacagagcgcacggcatcggggttatctgcatccggttgcaattctcgtggagaatct
atcttaggatttgatgctaacgctcagttcaacatgcgaggatgttcgaataaatttatt
atgcagaaagactttcaggtagatggtgcccgtctttttgatattgattcttccggccaa
atttttgtaattgctcgaaggctctcaggaatgggaggagcacatgtgctaaccaaagta
agcttattatctaacaacgacaaggaggatatttggcttcctgagaacacaaaagctgtc
aaggatctacaaatttctcctcatgctagacttgtgctgttggcttccttaggaaagaaa
ctatccgttcttagcacagaaagcaacaatgccgttcttacttatgaattgccggctgca
gcctggtcatgttcatgggatattagcagttcacattatgcatatgcgggtttgcagaat
ggcacagttttgcagtttgatatgcgttacacaatgagacatgtgcaatctttttccggg
ttgacatgcaacccaattcatacattgtattctcttttgcccaagtcatctcttagttct
ggtgtcagaagtgttctctctgcatcttcacttggcttatgccaatggaactttggtggc
agtgaagacaggccatatttaattcctgaatctgatgagcacggagtttgtatatctctt
gctttctgtaaatccagtgatgatattgttgcttcatatcgtcctaaaattgagatatct
ggtgatctggatttttgtcaaccaacacttactgcacccgggcaaaggacaaggggaagt
cacgtcctttacagaaaaatgggttgcacatataaaaaattaggagcaacttgcgccaat
gtgagtgatatccgactgccaaaatctacaattatagatggggtatatcggaaccctgtg
tttgcttcttcagatgaattgacatctgaacttgtgttgcaagagttaccatctttgatg
gttgttgagcatcttaaacctaaaaaatatcccattcgtgacgtcaagtaccaccgtcaa
ttaagttcgggactacttagctgtttgactgaggattccttgcagctattcacagccaag
cccttgtga
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