Sesamum indicum (sesame): 105174282
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Entry
105174282 CDS
T04135
Name
(RefSeq) cell division cycle protein 48 homolog
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sind
Sesamum indicum (sesame)
Pathway
sind04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
105174282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105174282
03009 Ribosome biogenesis [BR:
sind03009
]
105174282
04131 Membrane trafficking [BR:
sind04131
]
105174282
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sind04147
]
105174282
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
105174282
Ribosome biogenesis [BR:
sind03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
105174282
Membrane trafficking [BR:
sind04131
]
SNARE
SNARE associated proteins
Others
105174282
Autophagy
Aggrephagy
Other aggrephagy associated proteins
105174282
Exosome [BR:
sind04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105174282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_2
AAA_33
AAA_5
AAA_22
AAA_14
TIP49
NPHP3_N
RNA_helicase
nSTAND3
AAA_28
Mg_chelatase
AAA_17
ATPase_2
AAA_18
Parvo_NS1
AAA_lid_PRS2_C
IstB_IS21
ABC_tran
Viral_helicase1
AAA_7
NACHT
NB-ARC
AAA_24
TsaE
Vps4_C
DUF815
Zeta_toxin
Zot
Molydop_binding
Motif
Other DBs
NCBI-GeneID:
105174282
NCBI-ProteinID:
XP_011094628
UniProt:
A0A6I9UA89
LinkDB
All DBs
Position
LG11:13157126..13161516
Genome browser
AA seq
806 aa
AA seq
DB search
MSNQAESSDAKGTKRDFSTAILERKKAPNRLVVDEAVNDDNSVVCLHPETMEKLQLFRGD
TILIKGKKRKDTVCIALADDTCDEPKIRMNKVVRNNLRVRLGDVVSVHQCADVKYGKRVH
ILPVDDTVEGVTGNLFDAYLKPYFLEAYRPVRKGDLFLVRGGMRSVEFKVIETDPAEYCV
VAPDTEIFCEGEPIKREDEDRLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVK
PPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKN
APSIIFIDEIDSIAPKREKTNGEVERRIVSQLLTLMDGLKARAHIIVIGATNRPNSIDPA
LRRFGRFDREIDIGVPDEVGRLEVLRIHTKNMKLADEVDLESIAKNTHGFVGADLAALCT
EAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFQTALGISNPSALRETVVEVPNVSW
EDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQ
ANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGA
ADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRLQI
FKACLRKSPVSKDVDLRALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRRREN
PEAMEEDVEDEVAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRFNE
NSSAATGADPFAAPAAAAAEDDDLYS
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatcaagcagaatcctctgatgctaagggtacgaagagggattttagtacagcg
attctggagaggaaaaaggcgccgaatcggctggtggtggatgaggctgtcaatgatgat
aattccgtggtgtgtcttcaccctgaaactatggaaaagctccagcttttccgcggcgac
actatcttaatcaagggtaagaaaagaaaggatacagtatgcattgcccttgctgatgat
acatgtgatgaaccaaagattcgaatgaacaaggttgttagaaacaacctcagggttagg
ctcggagatgtggtttctgtgcatcaatgtgctgatgtgaagtatgggaagcgtgtgcac
attcttcctgtggatgacacagttgaaggtgttactggaaatctctttgatgcttacctg
aagccatatttccttgaggcataccgtccagtaaggaaaggggacctgtttcttgttagg
ggaggaatgagaagtgtagagttcaaggttattgagactgatcctgccgagtattgtgtt
gttgcccctgacactgagatcttctgtgagggggaacccattaaaagggaggacgaggat
cggttggatgaggttggctatgatgatgttggtggtgttcgcaaacagatggctcagatt
cgtgagttggtagagctgccacttaggcacccacaacttttcaaatcaattggggtcaag
cctccaaaaggaatattgctttacggacctccaggatctggaaagaccttaattgccaga
gcagtggccaatgagactggtgcctttttcttctgtatcaatgggccagaaattatgtca
aaattggcaggagaaagtgaaagcaatctgaggaaggcatttgaagaagctgagaaaaat
gcaccatccatcatattcattgatgaaattgattcaattgctccaaagagagagaaaact
aatggagaggttgagaggagaattgtttcccaactcttgacattgatggatggactgaaa
gcccgtgcccatattattgtaattggtgctacaaaccgtcccaatagcattgaccctgcc
ttaagaaggtttggtagatttgacagggaaatagacattggtgttcctgatgaagttggg
cgtcttgaggttctccgtatccatacaaaaaacatgaagcttgctgatgaagttgatttg
gaaagtattgccaagaacacacatggatttgtcggtgctgacttagctgctctttgtacc
gaggctgcccttcagtgcatcagggagaagatggatgtgattgacttggaagacgattcc
attgatgcagagatactgaactccatggctgtcaccaatgagcacttccagactgctctt
ggaataagcaatccctctgccctgcgtgaaactgttgttgaagtgcccaatgttagctgg
gaagatattggaggccttgagaatgtcaagcgtgaactgcaagagactgttcaatatcca
gtggaacatcctgagaagtttgaaaagtttggtatgtcaccttccaagggggttcttttc
tacggtcctcctggatgtggaaaaactttactagccaaggctattgccaatgaatgtcaa
gcaaactttatcagcgtcaagggtcctgaactgttaactatgtggtttggagagagtgaa
gcaaatgttagagagatttttgacaaggctcgccaatctgccccttgtgtcctatttttt
gatgaattggactccattgcaactcagagaggaagcagtgtaggagatgccggtggtgct
gctgacagagtacttaatcagcttctgacagaaatggatggcatgaacgcgaagaaaact
gttttcattatcggtgccaccaacaggcctgatataattgatcctgcacttctccgtcct
ggtcgtcttgatcagttgatttacatccctctccctgatgaggactcacggcttcagatc
ttcaaggcatgcttgagaaagtcgcctgtctccaaagacgtagaccttagagcccttgct
aaatacacacaaggtttcagtggtgctgacattacagaaatatgccaacgtgcgtgcaaa
tatgctatcagagagaacattgaaaaagatattgagagggagaggagaagaagagagaat
cctgaggcaatggaggaagacgttgaagacgaggtagctgagattaaggctgctcatttt
gaggaatcaatgaagtatgctcggaggagtgtcagtgatgctgacattcgcaagtaccag
gcatttgctcagacgttgcagcaatcaagggggtttggttctgaattccggtttaatgag
aacagtagcgctgctaccggagctgatccctttgcagctcctgctgccgcagcagccgag
gatgatgacctgtatagttag
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