Sesamum indicum (sesame): 105174593
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Entry
105174593 CDS
T04135
Name
(RefSeq) transcription factor bHLH140 isoform X1
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105174593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sind03400
]
105174593
Enzymes [BR:
sind01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
105174593
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
105174593
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
105174593
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
105174593
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
105174593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcpS_C
AAA_33
zf-C2HE
Macro
HIT
AAA_18
6PF2K
Zeta_toxin
KTI12
AAA_16
Motif
Other DBs
NCBI-GeneID:
105174593
NCBI-ProteinID:
XP_011095043
UniProt:
A0A6I9U3L8
LinkDB
All DBs
Position
LG11:complement(14854690..14858804)
Genome browser
AA seq
754 aa
AA seq
DB search
MMESMEIDREKAPFTGEENKETKPIVVVLVGLPGSGKSTFSDEVMRISSRPWARVCQDTI
NNGKSGTKIQCLSVAATALKDGKSVFIDRCNIDREQRADFLKLGGQQTEKHAVVLDHPAK
LCISRSVKRTGHEGNLQGGKAAAVVNQMVPKKELPKLSEGFDRITFCHDERDVKEAVNVY
GSLSPLDSLPSGCFGQKKSDAKIQLGIMKFLKKVDPSGNAGSDPTVRQKCSPNKLSVGED
TVLQRSKMDSAALEKVGKSNELDITSTSGANSANSIPTLAFPSISTADFQFNLEKASDII
VEKVEEFIGRIGKARLVLVDLSQGSKILSLVKTKAAQKNIDSNKFFTFVGDITRLHSQRG
LHCNVIANAANWRLKPGGGGVNAAIFKAAGSALEIATKEKAVSLSPGKSVVVPLPSSSPL
FAREGVTHVIHVLGPNMNPMRPDCLKDDYVQGCKILREAYSSLFEGFVSIVRSHGVASIH
NSGRPLESGGFQEVIPTNDDQKAKREADYESERSKKYKGLRLDLKSGASSLMDEEKIQDK
SVNMTKSWASWAQALHDVAMHPNKHKNVILEISDDVLVMNDAYPKAQRHLLVLARVDGLD
SIADICREHVPLLKTMHAVGLKWAVKFLNENKSLSFRLGYHSVPSMRQLHLHVISQDFDS
IHLKNKKHWNSFTTPFFLDSVVVIKELEDVGRVTLKDDKCLAMELRCHRCRSAHPNIPRL
KSHISSCQAPFSADLLQNGRLVSSTGCFCYQTIA
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgatggagtcgatggaaattgatcgagaaaaagcaccgtttacaggggaagaaaataag
gaaaccaagccaatcgtagtagtattggtgggcctgcctggaagtgggaaatctactttt
agtgatgaagtcatgagaatttcttcccgtccctgggctcgtgtttgccaggatactatt
aataatggtaagtctgggacaaaaattcagtgtctgtcagttgcagctactgctttaaag
gatggtaagagtgtgtttatagatagatgcaacattgatagagaacagcgggcggacttt
ctgaagcttggtggccaacagacggagaaacatgctgtcgtgcttgatcatccagccaag
ctttgtatttctcgttctgtgaagcgtaccggacatgaaggcaacttacaaggtgggaaa
gctgctgctgttgtgaatcaaatggtgccaaagaaagaacttcctaaactgagtgaaggg
tttgaccgaattacattttgtcacgatgaaagggatgtcaaagaagctgtcaatgtgtat
ggttcactcagtccattagattctcttccttctggctgttttggacagaagaagtcagat
gccaagattcaactagggataatgaaatttcttaaaaaagtagatccttctggtaatgct
ggatctgatccaactgtccgtcagaagtgtagcccgaacaaactatctgtgggagaggat
actgtcctgcagagaagcaaaatggattctgctgctctcgagaaggtgggaaaaagtaat
gaattggacattacctctacttctggtgccaattctgccaacagtattcccactttggca
tttccatctatttctactgcagactttcaattcaatcttgagaaggcatctgacattatt
gttgagaaagttgaggaatttatcggtaggattgggaaggctagacttgttttagtagat
ctgtcgcagggatcaaaaatattgtccctggttaagactaaagctgcacaaaagaacatt
gactccaataagttctttacatttgttggagatataactcgactacattctcagagaggc
ttacactgtaatgttattgctaatgctgccaactggcgtttaaaaccaggaggtgggggg
gtaaatgctgctatcttcaaagctgcaggttctgcactagaaattgcaaccaaagaaaag
gctgtgtcccttagtcctggaaaatcagttgttgtgccacttccttcatcttctccattg
tttgctagggaaggtgtaacccatgtcattcatgttcttggaccaaatatgaaccccatg
agacctgattgtcttaaagatgactatgttcagggatgcaagatacttcgtgaagcttat
tcatctctctttgaagggtttgtttctatagttaggtcccatggagtagcctctatacac
aacagtggaagaccattagaatctggaggattccaagaggtaatccctactaatgatgat
cagaaggccaaaagggaagctgattatgaatctgaaaggagcaaaaagtataagggactc
cgactggaccttaaatctggtgccagcagcttgatggatgaggaaaaaatccaggataaa
agcgtgaacatgaccaagtcctgggcgtcatgggcacaagcccttcatgatgttgctatg
catcccaacaagcacaagaatgttattcttgagatatcagatgatgttttagtgatgaat
gatgcttatccaaaggctcagcggcacctcttagtattagcgcgggttgatggtctcgac
agcattgctgatatatgtagagagcacgtcccattgttgaagacaatgcatgctgttggc
ttgaaatgggcagtaaagttcctcaatgaaaataaatctttgtcatttcgccttggatac
cactcggtcccttcaatgcgtcaattgcaccttcatgtaattagccaggatttcgactcc
atccatctgaagaacaagaagcattggaactcattcaccactccattcttccttgattca
gtagttgtgataaaggaactcgaagatgttggacgtgttacattgaaagacgacaagtgc
ctggcaatggagctgcggtgccaccggtgtcgaagtgcacatccaaatatacctcgcctc
aaatcacatattagctcttgtcaagccccattttctgctgatctactccaaaatggccgg
cttgtctcttccacaggctgcttttgttatcaaaccatcgcctaa
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