Sesamum indicum (sesame): 105174738
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Entry
105174738 CDS
T04135
Name
(RefSeq) protein BREAST CANCER SUSCEPTIBILITY 2 homolog B
KO
K08775
breast cancer 2 susceptibility protein
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03440
Homologous recombination
sind03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
105174738
03460 Fanconi anemia pathway
105174738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sind04121
]
105174738
03036 Chromosome and associated proteins [BR:
sind03036
]
105174738
03400 DNA repair and recombination proteins [BR:
sind03400
]
105174738
Ubiquitin system [BR:
sind04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
105174738
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
105174738
DNA repair and recombination proteins [BR:
sind03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
105174738
FA (Fanconi anemia) pathway
Downstream FA components
105174738
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_OB1
BRCA2
BRCA-2_helical
Tower
Motif
Other DBs
NCBI-GeneID:
105174738
NCBI-ProteinID:
XP_011095226
UniProt:
A0A6I9U403
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Position
LG11:complement(14970012..14977074)
Genome browser
AA seq
1141 aa
AA seq
DB search
MSTWQIFSDGRNKFRWEITDHQVEKEEQCDAVHQQRTDGRRLPSMADLLLLGCSKLVENG
QGIEEDPPMFRTGLGKSVQVMQSSIAKARSVLGDVDDDTLTDKGIGHFAGSENGYALSKP
MFEMDSQRSVVTLKSRLQSASESVLNMSNSMFQTGSGKTVNISSAGLLRAKTLLGLDQNY
DRESLDVFEQTKKKSTSTKSRKNLSHLETEDVSTLSLSSSTKVLTSSSLPSDSCRTAAKE
FQDFTAPKPPPIRFQTAGGRSISVSSEALQRARSLLGNPEFDSFLNDASTDPQFSVTDDG
KPSSSSNQENDLSTPFLQKGIDNGDWSLRNFTSPFASSTYLKQSLGKSEKLLPRNNLITK
FDMEAATNTFDRPYNGLSCDGKPPKVNSSSEKLDCLGNSVQLKVDPLKRSLSNRALVDIS
NTMKTDHIDNKQYLGEKRRVRRISYVSPFKKPRSSFVTPLNKSNSSVLNALSRPAPEEPS
CRKRVSMRYPLQVQRAYVKEYVLQPPSLQEKMVNLLEHVKRMNPVAAESYTFQNETSSEC
IGPEAFYLMLSQSGASLQYLTKEWVSNHYKWIVWKLASYERCYPAKFSGKLLTVTNVLEE
LRYRYEREVNHGHRSAIKKILDGDAPPSSIVLCISAVGESHDLKFGDQSASTEENGDDRT
SKIELTDGWYSVKALLDELLSQKLASGKLFVGQKLRIWGAKLCGWPGPVSPFEASKTTSL
LLHMNGTYRCHWAERLGFCKSAGVPLAFRCIKGTGGTVPSTLVGVTRIYPVLYRERLSNG
SFIVRSEREEAKALQLYNERRDVVAEGIISGFQKETEFNVGYDHESEEGAKLMKLLETAA
EPEVLMAGMSSKELTSFASYKTKLEAMRQSDMQISIQKAMEAAGLNEREVTPFLRIKVLG
LTNKHQPRERSPRKGLITIWNPTQEQMLELSEGQAYAVGGLVPSSSDSGILYLQARGSAS
NWRPLSPLMMKNFEPFFTLRSSTAISSLSEVPILSEFDIAAFVVYVGEVYRQGHQQKQWV
FVTDGSTAGFCSKESLDALLAINFCLPYTEFDSSAPVNSNIVGSVVGFCNLTKRPRDQVN
GLWVAEATENSDYFLSYDHAGYSHLKDVAASVLKWANTSSLITEKLKETVSSIIRNSKDG
C
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgtggcagatattttccgatggcaggaataaattccggtgggaaattaccgat
caccaggtcgagaaagaagagcaatgtgacgccgtacaccaacaacgtaccgacggtcgt
cgtctaccttccatggccgatctgttgcttctaggttgttccaagttggtggagaatggg
cagggcattgaggaagacccaccaatgtttcgaactggattgggaaagtctgttcaggtg
atgcagtcttcaatagcaaaagcacgctcagttcttggtgacgtggatgatgacacgttg
actgataagggtataggccactttgctggaagtgaaaatggatatgctctgtcgaaacca
atgtttgagatggactcacagagatcagtggttacattgaagtccaggttgcagagtgca
tcagaaagtgtacttaatatgtcaaattccatgttccagacaggatcaggaaaaacagtc
aacatatcttcagctggcctacttagagcaaaaactttgctaggtctggaccaaaattat
gatcgagagtctttagatgtatttgaacagacaaaaaaaaagtctacttccacaaagtct
cgcaaaaatctatctcatctagagactgaggatgtgagtaccttaagtttgagtagttct
accaaggttttgacatcttccagtcttccttctgattcctgcagaactgcagcaaaggaa
tttcaagatttcacggctccaaagcctcctcctatcagatttcaaactgctggggggaga
tccatatcagtttctagtgaagcattgcaacgagcgagaagtttgcttggaaatcctgaa
tttgattcatttttaaatgatgcaagcactgatccacagttttcagtaactgatgatgga
aaacccagtagttcttctaaccaagaaaatgatcttagtacaccatttttgcagaagggg
atagataatggtgactggtccctgaggaattttacatcaccctttgcatcaagcacatac
ctgaagcagtcattgggtaaatctgagaaactattaccacggaataacttgattacaaag
tttgatatggaggcagcaactaacacttttgataggccttataatggacttagttgtgat
ggaaagcccccaaaagttaacagctcttcagaaaagttggactgtttgggaaattcagtt
cagctgaaagttgatcccttgaagcggtcattatccaatcgggcactggtggatatctca
aataccatgaaaacggatcacattgataataagcaatatttaggtgaaaagcgaagagtt
cgaaggattagctatgtttctccatttaagaagcctcggagttcatttgtcaccccttta
aacaaaagtaactcttcagttcttaatgctttgtctagaccagcaccagaagagccttct
tgcagaaagagggtttcaatgagatacccacttcaggttcaacgagcatatgtcaaagaa
tatgttttacagcctccatcacttcaagaaaagatggtgaacttgctagagcatgtgaaa
agaatgaacccagttgctgctgaaagttacacattccagaatgaaacatcttcagaatgc
attggtccagaggctttttacttgatgttgtctcagtctggagcttccctccaatatttg
accaaagagtgggtttcaaatcactataagtggattgtttggaaacttgcctcttatgag
aggtgctatcctgctaaattttctggcaaattgttgacagtcactaatgtgcttgaagaa
ttacggtacaggtatgagagagaagtaaatcatgggcatagatcagcaatcaagaaaatc
ttagatggagatgcgccaccttcttcaatagtactttgcatttccgctgttggtgaaagc
catgacttaaagtttggagatcaatctgcttcaacggaggagaatggcgatgatagaact
tcaaaaatagagttaactgatggatggtattccgttaaagctttgttggatgaactacta
tctcagaagcttgcttcaggaaagttgtttgtggggcaaaaactcaggatctggggagcc
aaactctgtgggtggcctgggcctgtttcaccctttgaggcatcaaagacaactagttta
ttattgcatatgaatggcacttacagatgtcattgggctgaaagattgggattctgtaaa
agtgctggtgttccattggcattcagatgcatcaagggtactggaggcacagtccccagc
actttggttggtgttacaaggatatatccagttttgtatagggaaaggttaagcaatggg
agtttcattgtgaggtctgagagagaggaagctaaagcactgcagttatataatgaaagg
cgtgatgttgttgctgaaggaatcatatcaggattccaaaaggaaacagaatttaatgtt
ggttatgatcatgaaagtgaagaaggggccaaacttatgaagttacttgagacagctgcg
gaaccagaggttttaatggcgggaatgagctcaaaagaattaacttcttttgcttcttat
aaaacgaagttggaggcaatgaggcagtcagacatgcaaatatctattcagaaagctatg
gaggctgctgggcttaatgaaagagaggttactccatttttgaggattaaagttcttggt
ttgacaaataaacaccaaccacgagaacgttctcctaggaaaggcttgataacaatatgg
aatccaacacaggaacagatgctagagctctccgaagggcaggcatatgctgttggaggc
cttgtaccatctagctctgattcaggtatcctttacctacaagcaagaggatcagccagc
aattggcgacctctgtctccattgatgatgaagaattttgagccattcttcactcttcgt
tcatcaactgcaatatcaagtttgagcgaagttcccatcttgagtgagtttgacattgca
gcttttgttgtttatgtgggagaggtatatagacaaggtcatcaacagaagcagtgggtg
ttcgtgacggatggatccacagctggattttgttccaaggaatcactggatgcattactg
gccattaacttctgcttgccatacactgaatttgactcatctgcaccagtaaactctaat
attgtaggatctgtggttgggttttgcaatctcaccaagagaccaagagatcaagtaaat
ggcctgtgggtggctgaagcaacagaaaattctgattactttctaagttatgatcatgca
ggttatagccatttaaaagatgttgctgcttcagtgttaaaatgggcaaatacatcaagt
ctgataaccgagaagcttaaggagactgtctcttctattatcagaaactcaaaagatgga
tgttga
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integrated database retrieval system
