Sesamum indicum (sesame): 105174918
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Entry
105174918 CDS
T04135
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105174918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sind03021
]
105174918
03036 Chromosome and associated proteins [BR:
sind03036
]
105174918
Transcription machinery [BR:
sind03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105174918
Coactivators
SAGA/TFTC/STAGA complex
105174918
Chromosome and associated proteins [BR:
sind03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105174918
STAGA complex
105174918
TFTC complex
105174918
SAGA complex
105174918
SLIK complex
105174918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CBFD_NFYB_HMF
TAF4
Motif
Other DBs
NCBI-GeneID:
105174918
NCBI-ProteinID:
XP_011095475
UniProt:
A0A6I9U7W6
LinkDB
All DBs
Position
LG12:1146850..1151486
Genome browser
AA seq
546 aa
AA seq
DB search
MSIVPKETIEVIAQSIGITNLSPDVLPALAADVEYRVREIMQEAIKCMRHSRRTTLTTDD
VDSALGLRNVEPIYGFASGDPLRFKRAAGHKDLFYVEDKDVEFKEVIEAPLPKAPLDTAV
VAHWLAIEGVQPAIPENPPPEALQTLSMPSDNRKTEFKDDGVPVDIKLPIKHVLSRELQL
YFEKITELTVSRSESPLFKEALVSLATDSGIHPLVPYFTFFVADEVSRNLNNFSLLFALM
RLVWSLLRNPHIHIEPYLHQLMPSVMTCLVAKRLGNKFSDNHWDLRNFTANLVASICKRF
GHVYHNLQPRVTRTLLHAFLDPSKALPQHYGAIQGLAALGPNVVRLLILPNLEPYLRLLE
PEMQLEKQKNEMKRHEAWLVYGALMRAAGLCMYDRLKMLPSLLSPPARTVWKSNSKVLTT
GSNKRKASMDNMMHQPPLKKLATDSSVGVITPNSLPADMPGTSSGYSANVGADSNMQSSR
PLTNNNVPGSSGRKEIVGGQGLKQSATLDQAWKEDADARHLLPLLYEHFGESMLSFVPSP
EAAVFL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgagcatagtaccgaaagaaacaattgaggtgatagcgcagagcattggcatcaccaat
ttatcccccgatgtgttgcctgctctggctgctgatgtggagtaccgcgttcgcgaaatc
atgcaggaagcaatcaaatgcatgcgacattcgcggagaactactttaactacggacgac
gttgatagtgcccttggattaagaaacgtcgagccaatatatggatttgcttctggagac
ccattgcggttcaaaagagctgcagggcacaaggacttgttctacgttgaagataaggat
gtggagttcaaggaggtgattgaagcgccgctgccgaaggccccgttggacacagcagtg
gttgctcactggttagctattgaaggagttcaacctgctattccagaaaatcctcctcct
gaagctcttcagacactatcaatgccctctgataacagaaagactgagtttaaagatgat
ggagtacctgttgacattaaattaccaattaagcatgtactttcacgggaacttcagctt
tactttgagaagatcactgagttgactgtgagtagatctgagtctcctctgtttaaagaa
gcattagtcagcttggcaactgactcggggatccatccattagttccttactttacattt
tttgttgctgatgaggtttctcgcaacctgaataatttttctctcctttttgctttgatg
cgtcttgtctggagccttcttcgaaatccacatatacacatagagccatatctgcaccaa
ttaatgccttcggtgatgacttgcctcgttgctaaaagattgggaaataaattctccgac
aaccactgggatcttagaaatttcacagctaatctggttgcttccatatgtaagagattt
ggccatgtttatcacaatctccagccacgtgtaaccaggacgttgctgcatgctttcttg
gacccatcaaaagctctccctcaacattatggtgctattcaaggcctagcagccctcggg
cctaatgtggttcggttgctgatacttcccaatctagagccttatttgcggcttctggag
ccagaaatgcaactagagaagcaaaagaatgagatgaagaggcacgaagcctggcttgta
tatggggcgttaatgcgcgcagctggtttgtgcatgtatgatcggttgaagatgctacct
tctctactgtctccacctgcacgtactgtctggaagagtaatagcaaagtcctgacgacg
ggttcaaataagcgtaaagccagcatggataacatgatgcaccagcctccattgaagaaa
ctagcaacagacagttctgtcggagtaataaccccgaactcactgccggcggacatgcca
ggaactagcagtggatattcagcaaatgttggggcggactctaatatgcaatcatcaagg
cctttaacaaataacaacgtgcctgggtcaagtggcagaaaggagattgttggtggccaa
ggactgaagcaatcagctactcttgatcaggcgtggaaggaggatgccgatgctaggcat
ttgttacctttgttgtatgaacattttggtgaaagcatgctctcctttgtaccttcacct
gaggcagctgtattcttataa
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