Sesamum indicum (sesame): 105174937
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Entry
105174937 CDS
T04135
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105174937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sind03019
]
105174937
Messenger RNA biogenesis [BR:
sind03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105174937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
105174937
NCBI-ProteinID:
XP_011095499
UniProt:
A0A6I9UM11
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Position
LG12:complement(1252504..1256956)
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AA seq
476 aa
AA seq
DB search
MEVDQGKLFIGGISWDTNEDRLKEYFGAYGKVVEAVIMRDRTTGRARGFGFVVFADPAVA
ERVVKEKHMIDGRTVEAKKAVPRDDQHLINRNSGSIQGSPGPGRTKKIFVGGLASTVTES
DFKNYFDQFGTIMDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHKTFHELNGKMVEVKR
AVPKELSPGPSRGPLVGYNYGFNRANNFLNNYAQGYNLGSVGGYGVRMDSRYNPVTSGRA
GFSHFGSPAYGMGVNMEQGLNGGFGGGSNFSSNLGYGRVLSPYFGSNQSRYNTPIGYNAS
SSRGDSFLNSSPRNVWGNGGLNTSPNNASSGSYFGSGSGGFGVFGNNGASWGTSPIGAPL
GGNSSGYNGGNIGYRGGENSYSLGAGGFGRNSGTGVATTSSFAASSGDYEGSYGDFYRSG
SVYGDPTWQSASSELENSGSFGYGLGNSEDVTAKDSEDYGVGYDIPNRQSSRGIAA
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggatcaaggtaagctctttattggtgggatttcttgggacacgaatgaggat
cgtcttaaagaatatttcggagcatatgggaaagtggtagaggcagtgatcatgagagat
cgaacaaccggccgtgctcgtgggttcggctttgtagtctttgctgaccctgcagttgct
gagagagtggtgaaggaaaagcacatgattgatggacgaactgttgaagctaagaaagct
gttccaagggatgaccaacacctgataaatcgaaacagtggcagcattcagggatcacca
ggacctggacgcactaaaaagatttttgtaggaggattagcatcgaccgtcaccgagagt
gactttaaaaattactttgatcagtttggcaccataatggatgttgtagtgatgtacgac
cacaacactcaaaggcctagaggttttggatttataacttatgattcggaggatgcagtg
gatagggtgttgcacaaaacttttcatgaactcaatggtaagatggtcgaggtaaagcga
gcagttccaaaagaattatctccggggcccagcaggggcccgcttgttggttacaactat
ggttttaatagagccaacaacttcctcaacaactacgcccagggatataatcttggctca
gttggaggctatggagtcaggatggacagtagatacaatccggtaactagtggccgtgct
ggtttctcacattttggttctcctgcttatggaatgggtgtgaatatggagcaaggtctg
aacgggggctttggagggggttctaactttagcagtaacctaggttatggtcgtgtactg
agcccctattttggcagtaatcagagtaggtacaatacccctattggttataatgcaagt
agcagcagaggtgattcttttctcaactcatcacctagaaacgtatggggaaatggtggc
cttaatacctcaccaaataatgccagctctggttcatattttggttctggaagtggtggt
tttggagtatttggaaacaatggagcaagctggggcacttcgcctattggcgcgcctctt
ggaggaaattcttctggctacaatgggggaaatattggctatagaggtggagaaaacagt
tactcgctgggagcaggaggatttggcagaaacagtggaactggtgtagcgacaacatct
tcatttgctgcctcaagtggtgattatgagggttcctatggggacttctaccgtagtggc
tctgtgtatggtgatccaacctggcaaagtgcatcttctgagctggagaattctggttca
tttggttatgggcttggaaattcagaagatgttactgctaaagattctgaggattatggg
gtgggctatgacattccaaacaggcaatcaagtagaggaatcgctgcttag
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