Sesamum indicum (sesame): 105175056
Help
Entry
105175056 CDS
T04135
Name
(RefSeq) WD repeat-containing protein 75
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
105175056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sind03009
]
105175056
Ribosome biogenesis [BR:
sind03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
105175056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WDR55
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
105175056
NCBI-ProteinID:
XP_011095677
UniProt:
A0A6I9UCQ5
LinkDB
All DBs
Position
LG12:1955574..1963038
Genome browser
AA seq
811 aa
AA seq
DB search
MITGGKRFVSSPPAFSNDAKRLLVCTGNTVSVFSTSTGLQISELEGHEAQVTSVIVVPPS
SPASKLMCYCWTASLDGKIKYWDFAAPELMTTIDIGSSIHSMVIPSLLSQSAESNGKHPD
LFAYIYTEDVKPREEKTDCLCGQIQKCNLTKSRIVGGVTLAKTRKPGSITISPSGKYIGT
YERQKLRIWEIPEKDSEHVGYKKIRLHHTKSFTALAFHPTERVVAAGDVTGRILIWRGVG
HKTCLNDGKLIRRGLNKDAEDQPGVRDDDDADSCTTWHWHSSQVNVLFFSSDGAYLYSGG
REGVLVVWQLDTGKKKFLPRIGSPLLYFVNSPDPSLSSISRADNQIQLLRMPSMEILRSI
SGIKPSSSHMEIYEGFGSGVVFNHTSGLLAVPTENYRVQFYSLFDDREISEVQICERNYQ
PGDEITVKVNLVAVSPDGSTMSTVETRLPEEGIGNLVSLKFWACSSQNKHFSLSTVIYEP
HGDGGISSIAFRPTSHMAVSSSYGGDFKVWVRRHEISTEDQTVENTGWRCHAVGSYKKKP
MTASAFSGDGSVLAVAAEKVITLWDPDRNILLSVIGDSLEPITSLSFVGKSEYLVSASRG
SDPQLTIWSMLKLCTTWSYRLDVEAVASSFDKSTFAVLALIKPAKHMESTEASLHSAEGV
ILLFNVENPVPLSTWFVSKAQGGGLSFVWSSPKSEDEVAETKAFDEVLAYINGAHEYVLL
SPHGEQASNLSFSRHRNFSSLEEKERSGYASIYGELPEFSLKIDQTPFTSMPSEKTWKTM
FSGPSHSLPPLPKLCSDFLESLLERRSALVE
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgattacaggtggaaagagattcgtctcttcaccgccggcgttctcaaacgatgccaag
cgactccttgtctgcacaggaaacactgtctcggtttttagcacgtccactggcttacag
ataagtgaattggaaggtcacgaggcgcaggtgacgtcggtgatagttgttccgccttct
agtccggcgagtaaactcatgtgttattgctggacagcgtccctggatggaaaaatcaag
tactgggattttgcggctcctgagttgatgaccactatcgacattgggtcgtccatacac
tctatggtcattccgagtttattaagccagagcgctgaaagcaatgggaagcatcccgat
ctttttgcttatatctatactgaggatgtcaaacccagggaagaaaagaccgattgttta
tgtggacagattcagaaatgtaacctgaccaagtcccgcatagttggtggagttactttg
gccaagactcggaaaccaggttccataaccattagcccttctggaaaatatattggaaca
tatgagaggcagaagctgcgaatctgggaaattccagagaaagattctgagcatgttggt
tataagaaaatcaggttgcatcatacaaaatcatttacagctctggcttttcatccgact
gagagggtggtagcagcaggggatgttacaggaaggatcttaatatggagaggtgttggg
cacaaaacatgtcttaatgacggtaagctaattcgtagagggctaaacaaggatgcagaa
gaccagcctggagtgagggatgacgatgatgccgactcttgcaccacgtggcattggcat
tcttcacaagtaaatgttctcttcttctcttcagatggtgcctatttgtactcaggtggt
agggagggagttttggttgtttggcagttggacactggaaagaaaaaatttcttccacgt
attggatctccgcttctgtattttgtcaattctccggatccttcattatcctctatatct
cgtgcagataatcaaattcagctactcagaatgccttcaatggagatcttgaggtcaatt
tcagggattaagccttcaagttcacatatggaaatatacgagggatttggctcgggggtt
gtctttaatcacacttctgggttgcttgcagtaccgacagagaattaccgtgttcagttt
tacagtttgtttgatgaccgtgagatttcggaggttcaaatctgtgagagaaactatcag
ccgggtgatgaaatcacggtaaaagtaaatttggtagctgtttcaccagatggttccacc
atgagcactgttgaaaccagacttcctgaagaaggtatcggcaaccttgtgagtcttaag
ttctgggcttgtagctctcaaaacaagcacttcagcttgtctacagtcatatatgaacca
cacggggatggtggtatctcctccatagctttccgtccaacttctcacatggctgtcagt
tcctcatatggtggtgactttaaggtatgggttcgtagacatgagatctcgactgaggat
cagacagttgaaaatactggctggagatgccatgctgttgggtcatacaagaagaagcct
atgacagcttctgcattttctggtgatgggtctgttttggctgtggctgcggagaaagtg
attaccttgtgggatccagacaggaacattctgctgtctgtaattggagatagtcttgag
ccaattacaagcctttcattcgttgggaagtcagaatatcttgtgtcagcttcccgaggt
tcagatccacagttgactatatggagcatgttaaagctgtgtacgacttggtcctacagg
cttgatgtagaggctgttgcctcttcgtttgacaagtcaaccttcgctgttcttgctctg
atcaagccagctaaacatatggagtccactgaagcctcattacatagtgccgaaggggtg
atcttgttgttcaatgtggaaaacccagtacccttgtctacgtggttcgtgagcaaggca
caaggtggaggactttcgtttgtttggtcaagccctaaatcagaagatgaagttgcagaa
acaaaagcattcgatgaagtacttgcttacatcaatggtgctcacgagtatgttctcttg
agcccacatggcgagcaggcgagtaatctcagcttttctcgtcaccggaatttcagtagc
cttgaggaaaaagaaagatcgggctatgcatccatctatggtgaactaccagagttcagc
ttgaaaatagatcagactcccttcacatcaatgccatcagagaaaacctggaagacaatg
ttcagtggaccatctcacagtcttcctcctctccccaagttgtgttcagactttctggaa
tcattgctggagaggagatctgcccttgtggagtga
DBGET
integrated database retrieval system