Sesamum indicum (sesame): 105175273
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Entry
105175273 CDS
T04135
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
sind
Sesamum indicum (sesame)
Pathway
sind03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sind00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
105175273
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sind03041
]
105175273
Spliceosome [BR:
sind03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
105175273
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
105175273
NCBI-ProteinID:
XP_011095961
UniProt:
A0A6I9UDG1
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Position
LG12:2911462..2915718
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AA seq
561 aa
AA seq
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MKTKREDSENAADEDGVAKRQKLTEDSSPQLAFENPILSLASYDDDEEEEDEARRDGNGG
KHVNNGRKEEGNGHNYSEDEDDDDEEDEESRVGQGKRSRAIEVRRDCPYLDTVNRQVLDF
DFEKFCSVSLSNLNVYACLVCGKYYQGRGQKSHAYTHSLEAGHHVYINLRTEKVYCLPDG
YEVIDPSLDDIRHVLNPRFSREQVEHLDRNRQWSRALDGSDYLPGMVGLNNIKETDFVNV
TIQSLMRVTPLRNFFLIPQNYIHCKSQLVLRFGELTRKIWHARNFKGQVSPHEFLQAVMK
ASKKRFRIGAQSDPVEFMSWLLNTLHGDLKSLKKGSSIIHQCFQGELEVVKEIHSKHIAE
KKENGDNQNNENGDDGGTEADKVMTETSKMPFLMLGLDLPPPPLFKDIMEKNIIPQVPLF
NILKKFDGETVTEVVRPRIARMRYRVTKLPQYLILHMRRFTKNNFFVEKNPTLVNFPVKN
LELKDYIPLPAPSDNEKLRSKYDLIANIVHDGKPGEGSYRVFVQRKSEELWYEMQDLHVS
ETLPQMVALSEAYMQIYEQQQ
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaagcgagaagattccgagaatgcagcggatgaagacggggttgcgaagagg
cagaagctaactgaagactcgtcgcctcagcttgcatttgaaaatccgatcctctcgctg
gcttcttacgatgacgatgaggaggaagaagatgaagctaggagagatgggaatgggggt
aaacatgtaaataatggcagaaaggaagagggaaacgggcataattattccgaggatgag
gatgatgatgatgaagaggatgaagaaagcagagtagggcaagggaagcgcagtcgcgct
attgaagtaaggagggactgcccgtatctggatactgttaatagacaggttttagatttc
gactttgagaaattttgctcagtatctctttcaaacttgaatgtgtatgcatgtttggtt
tgtggaaagtattatcaaggaagaggacagaaatctcatgcatatacacacagtcttgaa
gctggccaccatgtctacattaatcttcgaacagagaaagtttactgtctgcctgatgga
tatgaagttattgacccatcgctggatgatattcggcatgtacttaacccaagattttca
agagagcaagttgagcatcttgaccggaataggcaatggtcgagggcacttgatggttct
gattatcttcctggaatggtggggttaaataacatcaaagagactgattttgttaatgtt
accattcaatcattgatgcgtgttactcccctgaggaacttttttctcatcccccaaaac
tatatccactgcaaatcccaacttgttcttcgatttggggagctcacacgaaagatctgg
catgctaggaacttcaaaggacaggtgagtccacatgaatttctgcaggcggttatgaaa
gctagtaagaaacgtttccgaataggcgcccaatcagatccagttgaatttatgtcatgg
cttcttaatacactgcatggagatttgaaaagtttaaaaaagggtagcagcatcattcat
caatgctttcagggtgaactggaggttgtgaaagagattcatagcaaacatatagcagag
aaaaaagaaaatggggacaaccagaacaatgagaatggagatgatggtggaactgaagca
gataaagtgatgacagagacaagcaagatgcctttcttgatgcttggattagacttgcca
cctcctcctttgtttaaggacatcatggagaaaaacattattccacaggttccacttttc
aatatactgaagaagttcgatggggagactgtgactgaagttgtccgtcctcgtatagca
aggatgagatatcgtgtcacaaaattgccacagtatcttattctccacatgcgtcggttt
acaaagaacaacttctttgtggagaaaaatcctactcttgtcaacttccctgtgaagaat
cttgagctgaaggattacatccctctacctgcacccagtgacaatgaaaagttgcggtca
aagtacgatttaattgctaatattgttcatgacggtaagccgggtgaaggatcctacagg
gtgtttgtgcagcggaagtcagaagaactctggtatgagatgcaggaccttcatgtgtca
gaaacattaccccagatggttgcactttccgaggcatacatgcagatatatgagcagcaa
cagtag
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